RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 MRPS6P82932 125 aaKnown RBP15.9■□□□□ 0.14
CTSA-219ENST00000607841 ZRSR1Q15695 479 aaKnown RBP15.9■□□□□ 0.14
CTSA-219ENST00000607841 PSRC1Q6PGN9 363 aaPredicted RBP15.9■□□□□ 0.14
CTSA-219ENST00000607841 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
CTSA-219ENST00000607841 RASSF8Q8NHQ8 419 aa15.9■□□□□ 0.14
CTSA-219ENST00000607841 MMTAG2Q9BU76 263 aaKnown RBP15.9■□□□□ 0.14
CTSA-219ENST00000607841 CSRNP2Q9H175 543 aa15.9■□□□□ 0.14
CTSA-219ENST00000607841 DDX19AQ9NUU7 478 aaKnown RBP15.9■□□□□ 0.14
CTSA-219ENST00000607841 AKT3Q9Y243 479 aa15.9■□□□□ 0.14
CTSA-219ENST00000607841 ARHGEF35A5YM69 484 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 ZBTB39O15060 712 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 NCLP19338 710 aaKnown RBP15.89■□□□□ 0.13
CTSA-219ENST00000607841 CLCN3P51790 818 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 HYIQ5T013 277 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 TRAF7Q6Q0C0 670 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 LRRC71Q8N4P6 559 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 LINC01465Q8N7H1 131 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 TCP11Q8WWU5 503 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 MTRQ99707 1265 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 CELF4Q9BZC1 486 aaKnown RBP15.89■□□□□ 0.13
CTSA-219ENST00000607841 CCSER1Q9C0I3 900 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 DHX33Q9H6R0 707 aaKnown RBP15.89■□□□□ 0.13
CTSA-219ENST00000607841 CCDC39Q9UFE4 941 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 RBM19Q9Y4C8 960 aaKnown RBP15.89■□□□□ 0.13
CTSA-219ENST00000607841 TRPV2Q9Y5S1 764 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 CDY2AQ9Y6F7 541 aa15.89■□□□□ 0.13
CTSA-219ENST00000607841 FGBP02675 491 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 CHRNA1P02708 482 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 ACTN1P12814 892 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 GRIN1Q05586 938 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 MGAT3Q09327 533 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 TMEM62Q0P6H9 643 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 EMC2Q15006 297 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 ECM1Q16610 540 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 DEFB128Q7Z7B8 93 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 ZNF579Q8NAF0 562 aaKnown RBP15.88■□□□□ 0.13
CTSA-219ENST00000607841 USP38Q8NB14 1042 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 CLIC6Q96NY7 704 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 SCAND2PQ9GZW5 306 aaPredicted RBP15.88■□□□□ 0.13
CTSA-219ENST00000607841 MTIF3Q9H2K0 278 aaKnown RBP15.88■□□□□ 0.13
CTSA-219ENST00000607841 ATP6V0A4Q9HBG4 840 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 SUCLA2Q9P2R7 463 aaPredicted RBP15.88■□□□□ 0.13
CTSA-219ENST00000607841 RCOR1Q9UKL0 485 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 SQORQ9Y6N5 450 aa15.88■□□□□ 0.13
CTSA-219ENST00000607841 A0A087WWV3 80 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 ASAP2O43150 1006 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 CUTAO60888 179 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 NBNO60934 754 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 EYA4O95677 639 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 CXCL10P02778 98 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 ACRP10323 421 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 ME1P48163 572 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 CRYBB1P53674 252 aaPredicted RBP15.87■□□□□ 0.13
CTSA-219ENST00000607841 PADI6Q6TGC4 694 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 FAM43BQ6ZT52 329 aaPredicted RBP15.87■□□□□ 0.13
CTSA-219ENST00000607841 MCPH1Q8NEM0 835 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 PSPC1Q8WXF1 523 aaKnown RBP15.87■□□□□ 0.13
CTSA-219ENST00000607841 BHMT2Q9H2M3 363 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 TSHZ2Q9NRE2 1034 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 GINS2Q9Y248 185 aa15.87■□□□□ 0.13
CTSA-219ENST00000607841 A0A1W2PPC1 479 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 E9PMD0 336 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 USO1O60763 962 aaKnown RBP15.86■□□□□ 0.13
CTSA-219ENST00000607841 VTNP04004 478 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 EPHB4P54760 987 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 NLRP11P59045 1033 aaKnown RBP15.86■□□□□ 0.13
CTSA-219ENST00000607841 GRB10Q13322 594 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 MBTPS1Q14703 1052 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 TMEM119Q4V9L6 283 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 SPECC1Q5M775 1068 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 ODR4Q5SWX8 454 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 CNKSR3Q6P9H4 555 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 ZNF365Q70YC5 407 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 SEPT8Q92599 483 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 SYMPKQ92797 1274 aaKnown RBP15.86■□□□□ 0.13
CTSA-219ENST00000607841 APBB2Q92870 758 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 TMEM143Q96AN5 459 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 SPATA32Q96LK8 384 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 SCLT1Q96NL6 688 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 PNMA5Q96PV4 448 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 PRO3102Q9H379 93 aa15.86■□□□□ 0.13
CTSA-219ENST00000607841 GPR32O75388 356 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 CYP11B2P19099 503 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 GPC3P51654 580 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 MKRN4PQ13434 485 aaPredicted RBP15.85■□□□□ 0.13
CTSA-219ENST00000607841 DRP2Q13474 957 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 MXD4Q14582 209 aaPredicted RBP15.85■□□□□ 0.13
CTSA-219ENST00000607841 GPNMBQ14956 572 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 KARSQ15046 597 aaKnown RBP15.85■□□□□ 0.13
CTSA-219ENST00000607841 KIZQ2M2Z5 673 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 FBXO47Q5MNV8 452 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 TMEM240Q5SV17 173 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 CCDC73Q6ZRK6 1079 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 TSHZ1Q6ZSZ6 1077 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 C16orf59Q7L2K0 433 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 ZNF410Q86VK4 478 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 RHPN2Q8IUC4 686 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 TDHQ8IZJ6 230 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 NLRP7Q8WX94 980 aa15.85■□□□□ 0.13
CTSA-219ENST00000607841 EPSTI1Q96J88 318 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms