RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 BTG3Q14201 252 aaPredicted RBP15.06■□□□□ 0
CTSA-213ENST00000606782 LEXMQ3ZCV2 418 aa15.06■□□□□ 0
CTSA-213ENST00000606782 NAALADL2Q58DX5 795 aa15.06■□□□□ 0
CTSA-213ENST00000606782 CKAP2LQ8IYA6 745 aa15.06■□□□□ 0
CTSA-213ENST00000606782 BANK1Q8NDB2 785 aa15.06■□□□□ 0
CTSA-213ENST00000606782 P2RX5Q93086 422 aa15.06■□□□□ 0
CTSA-213ENST00000606782 NECAB3Q96P71 396 aaPredicted RBP15.06■□□□□ 0
CTSA-213ENST00000606782 C11orf84Q9BUA3 381 aaPredicted RBP15.06■□□□□ 0
CTSA-213ENST00000606782 RGS18Q9NS28 235 aa15.06■□□□□ 0
CTSA-213ENST00000606782 GPR182O15218 404 aa15.05■□□□□ -0
CTSA-213ENST00000606782 MGEA5O60502 916 aa15.05■□□□□ -0
CTSA-213ENST00000606782 GAS7O60861 476 aa15.05■□□□□ -0
CTSA-213ENST00000606782 RPS6KA5O75582 802 aa15.05■□□□□ -0
CTSA-213ENST00000606782 FDPSP14324 419 aaKnown RBP15.05■□□□□ -0
CTSA-213ENST00000606782 SARSP49591 514 aaKnown RBP15.05■□□□□ -0
CTSA-213ENST00000606782 FAM189BP81408 668 aa15.05■□□□□ -0
CTSA-213ENST00000606782 TARBP2Q15633 366 aaKnown RBP15.05■□□□□ -0
CTSA-213ENST00000606782 TMEM266Q2M3C6 531 aa15.05■□□□□ -0
CTSA-213ENST00000606782 LRCH2Q5VUJ6 765 aa15.05■□□□□ -0
CTSA-213ENST00000606782 NEK9Q8TD19 979 aa15.05■□□□□ -0
CTSA-213ENST00000606782 AIFM3Q96NN9 605 aa15.05■□□□□ -0
CTSA-213ENST00000606782 TEKT3Q9BXF9 490 aa15.05■□□□□ -0
CTSA-213ENST00000606782 UNC45AQ9H3U1 944 aa15.05■□□□□ -0
CTSA-213ENST00000606782 NSUN3Q9H649 340 aaKnown RBP15.05■□□□□ -0
CTSA-213ENST00000606782 C1orf112Q9NSG2 853 aa15.05■□□□□ -0
CTSA-213ENST00000606782 NRBP2Q9NSY0 501 aa15.05■□□□□ -0
CTSA-213ENST00000606782 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
CTSA-213ENST00000606782 ST3GAL5Q9UNP4 418 aa15.05■□□□□ -0
CTSA-213ENST00000606782 SAMM50Q9Y512 469 aa15.05■□□□□ -0
CTSA-213ENST00000606782 STK36Q9NRP7 1315 aa15.05■□□□□ -0
CTSA-213ENST00000606782 C9IYK1 514 aa15.04■□□□□ -0
CTSA-213ENST00000606782 GRM6O15303 877 aa15.04■□□□□ -0
CTSA-213ENST00000606782 NCK2O43639 380 aa15.04■□□□□ -0
CTSA-213ENST00000606782 JAK2O60674 1132 aa15.04■□□□□ -0
CTSA-213ENST00000606782 OATP04181 439 aa15.04■□□□□ -0
CTSA-213ENST00000606782 NFX1Q12986 1120 aaKnown RBP15.04■□□□□ -0
CTSA-213ENST00000606782 DSC3Q14574 896 aa15.04■□□□□ -0
CTSA-213ENST00000606782 TCEAL5Q5H9L2 206 aa15.04■□□□□ -0
CTSA-213ENST00000606782 KRT25Q7Z3Z0 450 aa15.04■□□□□ -0
CTSA-213ENST00000606782 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.04■□□□□ -0
CTSA-213ENST00000606782 ETNPPLQ8TBG4 499 aa15.04■□□□□ -0
CTSA-213ENST00000606782 PABPC5Q96DU9 382 aaKnown RBP15.04■□□□□ -0
CTSA-213ENST00000606782 PHF20Q9BVI0 1012 aa15.04■□□□□ -0
CTSA-213ENST00000606782 ADAMTS10Q9H324 1103 aa15.04■□□□□ -0
CTSA-213ENST00000606782 ORC3Q9UBD5 711 aaPredicted RBP15.04■□□□□ -0
CTSA-213ENST00000606782 PLAGL2Q9UPG8 496 aa15.04■□□□□ -0
CTSA-213ENST00000606782 MRPL42Q9Y6G3 142 aaKnown RBP15.04■□□□□ -0
CTSA-213ENST00000606782 DTNBO60941 627 aa15.03■□□□□ -0
CTSA-213ENST00000606782 STBD1O95210 358 aa15.03■□□□□ -0
CTSA-213ENST00000606782 TDP2O95551 362 aa15.03■□□□□ -0
CTSA-213ENST00000606782 TMOD1P28289 359 aa15.03■□□□□ -0
CTSA-213ENST00000606782 PRKCEQ02156 737 aa15.03■□□□□ -0
CTSA-213ENST00000606782 CAMK1Q14012 370 aa15.03■□□□□ -0
CTSA-213ENST00000606782 NONOQ15233 471 aaKnown RBP eCLIP15.03■□□□□ -0
CTSA-213ENST00000606782 UGCGQ16739 394 aa15.03■□□□□ -0
CTSA-213ENST00000606782 KIZQ2M2Z5 673 aa15.03■□□□□ -0
CTSA-213ENST00000606782 CTC1Q2NKJ3 1217 aa15.03■□□□□ -0
CTSA-213ENST00000606782 EFCAB12Q6NXP0 572 aa15.03■□□□□ -0
CTSA-213ENST00000606782 SLC24A5Q71RS6 500 aa15.03■□□□□ -0
CTSA-213ENST00000606782 FAM228AQ86W67 206 aa15.03■□□□□ -0
CTSA-213ENST00000606782 HSCBQ8IWL3 235 aa15.03■□□□□ -0
CTSA-213ENST00000606782 METTL13Q8N6R0 699 aa15.03■□□□□ -0
CTSA-213ENST00000606782 INTS4Q96HW7 963 aaKnown RBP15.03■□□□□ -0
CTSA-213ENST00000606782 CEP89Q96ST8 783 aa15.03■□□□□ -0
CTSA-213ENST00000606782 OSMRQ99650 979 aa15.03■□□□□ -0
CTSA-213ENST00000606782 ADAM2Q99965 735 aa15.03■□□□□ -0
CTSA-213ENST00000606782 NIFKQ9BYG3 293 aaKnown RBP15.03■□□□□ -0
CTSA-213ENST00000606782 ELAC1Q9H777 363 aaKnown RBP15.03■□□□□ -0
CTSA-213ENST00000606782 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
CTSA-213ENST00000606782 GINS2Q9Y248 185 aa15.03■□□□□ -0
CTSA-213ENST00000606782 MMP1P03956 469 aa15.02■□□□□ -0
CTSA-213ENST00000606782 VTNP04004 478 aa15.02■□□□□ -0
CTSA-213ENST00000606782 KCNA5P22460 613 aa15.02■□□□□ -0
CTSA-213ENST00000606782 CLCN3P51790 818 aa15.02■□□□□ -0
CTSA-213ENST00000606782 NLRP11P59045 1033 aaKnown RBP15.02■□□□□ -0
CTSA-213ENST00000606782 HMGN5P82970 282 aaKnown RBP15.02■□□□□ -0
CTSA-213ENST00000606782 PUS10Q3MIT2 529 aaKnown RBP15.02■□□□□ -0
CTSA-213ENST00000606782 XKR3Q5GH77 459 aa15.02■□□□□ -0
CTSA-213ENST00000606782 PPP4R3AQ6IN85 833 aa15.02■□□□□ -0
CTSA-213ENST00000606782 MIER3Q7Z3K6 550 aa15.02■□□□□ -0
CTSA-213ENST00000606782 SPPL3Q8TCT6 385 aa15.02■□□□□ -0
CTSA-213ENST00000606782 GJA10Q969M2 543 aa15.02■□□□□ -0
CTSA-213ENST00000606782 MAP7D2Q96T17 732 aa15.02■□□□□ -0
CTSA-213ENST00000606782 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.02■□□□□ -0
CTSA-213ENST00000606782 PCDHB7Q9Y5E2 793 aa15.02■□□□□ -0
CTSA-213ENST00000606782 IGKV6-21A0A0C4DH24 114 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 DENND3A2RUS2 1198 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 GRXCR2A6NFK2 248 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 ITGB1P05556 798 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 XBP1P17861 261 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 EIF4BP23588 611 aaKnown RBP15.01□□□□□ -0.01
CTSA-213ENST00000606782 CDC42EP1Q00587 391 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 INF2Q27J81 1249 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 TRMT1LQ7Z2T5 733 aaKnown RBP15.01□□□□□ -0.01
CTSA-213ENST00000606782 FAM178BQ8IXR5 827 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 WASF1Q92558 559 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 FAM20AQ96MK3 541 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 KCNMB3Q9NPA1 279 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 TMEM161AQ9NX61 479 aa15.01□□□□□ -0.01
CTSA-213ENST00000606782 DDX25Q9UHL0 483 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms