RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 TGS1Q96RS0 853 aaKnown RBP13.83□□□□□ -0.2
CTSA-210ENST00000606000 CEP89Q96ST8 783 aa13.83□□□□□ -0.2
CTSA-210ENST00000606000 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.2
CTSA-210ENST00000606000 ERVK-5Q9HDB9 667 aa13.83□□□□□ -0.2
CTSA-210ENST00000606000 AKT3Q9Y243 479 aa13.83□□□□□ -0.2
CTSA-210ENST00000606000 ATP2B1P20020 1258 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 GATMP50440 423 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 SPIRE1Q08AE8 756 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 ANO5Q75V66 913 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 FAM228AQ86W67 206 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 ZNF579Q8NAF0 562 aaKnown RBP13.82□□□□□ -0.2
CTSA-210ENST00000606000 C8orf76Q96K31 380 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 FAM20AQ96MK3 541 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 RC3H2Q9HBD1 1191 aaKnown RBP13.82□□□□□ -0.2
CTSA-210ENST00000606000 NRBP2Q9NSY0 501 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 BMP2KQ9NSY1 1161 aaPredicted RBP13.82□□□□□ -0.2
CTSA-210ENST00000606000 RGL1Q9NZL6 768 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 SQORQ9Y6N5 450 aa13.82□□□□□ -0.2
CTSA-210ENST00000606000 DDX11L8A8MPP1 907 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 TBX3O15119 743 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 MAGEB2O15479 319 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 MARCH6O60337 910 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 RPS6KA5O75582 802 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 LINC00271P0C7V0 271 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 FGFR4P22455 802 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 CRYBB1P53674 252 aaPredicted RBP13.81□□□□□ -0.2
CTSA-210ENST00000606000 NPEPPSP55786 919 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 NLRP11P59045 1033 aaKnown RBP13.81□□□□□ -0.2
CTSA-210ENST00000606000 PSMC5P62195 406 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 TBC1D8BQ0IIM8 1120 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 RABEP1Q15276 862 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 XKR3Q5GH77 459 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 DYDC2Q96IM9 177 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 ZSCAN31Q96LW9 406 aaPredicted RBP13.81□□□□□ -0.2
CTSA-210ENST00000606000 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 NAP1L4Q99733 375 aaKnown RBP13.81□□□□□ -0.2
CTSA-210ENST00000606000 LLPHQ9BRT6 129 aaKnown RBP13.81□□□□□ -0.2
CTSA-210ENST00000606000 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
CTSA-210ENST00000606000 TMEM60Q9H2L4 133 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 ADAMTS10Q9H324 1103 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 ST3GAL5Q9UNP4 418 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 ADGRA3Q8IWK6 1321 aa13.81□□□□□ -0.2
CTSA-210ENST00000606000 TTC3P53804 2025 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 ZBTB39O15060 712 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 CSDE1O75534 798 aaKnown RBP13.8□□□□□ -0.2
CTSA-210ENST00000606000 DGKIO75912 1065 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 GPC3P51654 580 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 CYP4A11Q02928 519 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 CTTNQ14247 550 aaKnown RBP13.8□□□□□ -0.2
CTSA-210ENST00000606000 CALCRLQ16602 461 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 PAN2Q504Q3 1202 aaKnown RBP13.8□□□□□ -0.2
CTSA-210ENST00000606000 EPC2Q52LR7 807 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 CRIPAKQ8N1N5 446 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 FBXO22Q8NEZ5 403 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 ZNF689Q96CS4 500 aaPredicted RBP13.8□□□□□ -0.2
CTSA-210ENST00000606000 LXNQ9BS40 222 aa13.8□□□□□ -0.2
CTSA-210ENST00000606000 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
CTSA-210ENST00000606000 SH2B1Q9NRF2 756 aaPredicted RBP13.8□□□□□ -0.2
CTSA-210ENST00000606000 FNDC1Q4ZHG4 1894 aaPredicted RBP13.79□□□□□ -0.2
CTSA-210ENST00000606000 DLL1O00548 723 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 GTPBP6O43824 516 aaPredicted RBP13.79□□□□□ -0.2
CTSA-210ENST00000606000 NEMFO60524 1076 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 POU3F3P20264 500 aaPredicted RBP13.79□□□□□ -0.2
CTSA-210ENST00000606000 MCM7P33993 719 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 TXKP42681 527 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 QARSP47897 775 aaKnown RBP13.79□□□□□ -0.2
CTSA-210ENST00000606000 NBR1Q14596 966 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 EPHA7Q15375 998 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 NPAS4Q8IUM7 802 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 KSR1Q8IVT5 923 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 FAM184AQ8NB25 1140 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 TBC1D32Q96NH3 1257 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 ADAM2Q99965 735 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 COL25A1Q9BXS0 654 aaPredicted RBP13.79□□□□□ -0.2
CTSA-210ENST00000606000 FTHL17Q9BXU8 183 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 HCSTQ9UBK5 93 aa13.79□□□□□ -0.2
CTSA-210ENST00000606000 REV3LO60673 3130 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 UNC80Q8N2C7 3258 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 A0A087WWV3 80 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 IGKV6-21A0A0C4DH24 114 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 POTEMA6NI47 508 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 CSPG5O95196 566 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 BAG4O95429 457 aaKnown RBP13.78□□□□□ -0.2
CTSA-210ENST00000606000 P4HBP07237 508 aaKnown RBP13.78□□□□□ -0.2
CTSA-210ENST00000606000 TMOD1P28289 359 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 CTNNB1P35222 781 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 HMGN5P82970 282 aaKnown RBP13.78□□□□□ -0.2
CTSA-210ENST00000606000 BTG3Q14201 252 aaPredicted RBP13.78□□□□□ -0.2
CTSA-210ENST00000606000 DSC3Q14574 896 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
CTSA-210ENST00000606000 SKIV2LQ15477 1246 aaKnown RBP13.78□□□□□ -0.2
CTSA-210ENST00000606000 TMEM192Q8IY95 271 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 NLRP7Q8WX94 980 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 CEP170P1Q96L14 293 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 SCLT1Q96NL6 688 aa13.78□□□□□ -0.2
CTSA-210ENST00000606000 MTMR9Q96QG7 549 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms