RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 GRIN2DO15399 1336 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 NEDD4P46934 1319 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 MAP3K15Q6ZN16 1313 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 CNTNAP4Q9C0A0 1308 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 GOLGA6L7A0A1B0GV03 622 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 FITM1A5D6W6 292 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 PDLIM1O00151 329 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 ABLIM1O14639 778 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 SLC3A2P08195 630 aaKnown RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 BMP7P18075 431 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 PAX7P23759 505 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 RPS6KA3P51812 740 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCNG1P51959 295 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 NAP1L1P55209 391 aaKnown RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 AMPD2Q01433 879 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 MYL5Q02045 173 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 PTPN11Q06124 597 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 G3BP1Q13283 466 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 MTA1Q13330 715 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 TOB2Q14106 344 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 SEPT6Q14141 434 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 NR1I3Q14994 352 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 SNCBQ16143 134 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 ADCK5Q3MIX3 580 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 HSP90AB2PQ58FF8 381 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 CEP85LQ5SZL2 805 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 CREB3L3Q68CJ9 461 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 SPECC1LQ69YQ0 1117 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 FAM173BQ6P4H8 233 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 TMED8Q6PL24 325 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 BLOC1S2Q6QNY1 142 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZNF572Q7Z3I7 529 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 ANKRD23Q86SG2 305 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 IRF2BP1Q8IU81 584 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 MFN1Q8IWA4 741 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 FUKQ8N0W3 1084 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 PDZD8Q8NEN9 1154 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 ENOX1Q8TC92 643 aaKnown RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 KCNG4Q8TDN1 519 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 MICAL1Q8TDZ2 1067 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC12Q8WUD4 166 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 GAL3ST3Q96A11 431 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 EVI5LQ96CN4 794 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 SDF4Q9BRK5 362 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 STK31Q9BXU1 1019 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 KRTAP4-11Q9BYQ6 195 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 AGXT2Q9BYV1 514 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 MIR1-1HGQ9H1L0 117 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 EPN3Q9H201 632 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 GOLPH3LQ9H4A5 285 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 C19orf44Q9H6X5 657 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 EBF2Q9HAK2 575 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 BABAM1Q9NWV8 329 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 STK26Q9P289 416 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 CPSF2Q9P2I0 782 aaKnown RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 GPR160Q9UJ42 338 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 CORO1CQ9ULV4 474 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 ADGRB3O60242 1522 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 PXDNLA1KZ92 1463 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 OVOS2A0A0G2JMS6 1433 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 OVOS2A0A0J9YW53 1432 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 OVOS2Q6IE36 1432 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 RIMS2Q9UQ26 1411 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 MROH1Q8NDA8 1641 aa4.54□□□□□ -1.68
HMGB1P50-201ENST00000605814 ABCC6O95255 1503 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 DLC1Q96QB1 1528 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 XRN1Q8IZH2 1706 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 GOLGA6CA6NDK9 693 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ANKRD65E5RJM6 399 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 SLC27A2O14975 620 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 SEMA7AO75326 666 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 PPFIA2O75334 1257 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ALDH1L1O75891 902 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 DNAJC8O75937 253 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZNF202O95125 648 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 RTN3O95197 1032 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ESR1P03372 595 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 IFIT2P09913 472 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 GOLGA6DP0CG33 693 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 SETSIPP0DME0 302 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 PRLRP16471 622 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 FERP16591 822 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZNF18P17022 549 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 EIF4BP23588 611 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 TNFRSF8P28908 595 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 GCLCP48506 637 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 TNNI2P48788 182 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 CDR1P51861 262 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCNHP51946 323 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 CLNS1AP54105 237 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 PTH1RQ03431 593 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 CKAP4Q07065 602 aaKnown RBP4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 DUSP4Q13115 394 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 MTX1Q13505 466 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 KRT24Q2M2I5 525 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 TBC1D25Q3MII6 688 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 DPCR1Q3MIW9 517 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 CCDC38Q502W7 563 aa4.53□□□□□ -1.68
HMGB1P50-201ENST00000605814 ZNF385BQ569K4 471 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms