RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 STAG3L1P0CL83 205 aa26.61■■□□□ 1.85
SSX2IP-209ENST00000603677 CD52P31358 61 aa26.61■■□□□ 1.85
SSX2IP-209ENST00000603677 ERVK-21P61565 698 aa26.61■■□□□ 1.85
SSX2IP-209ENST00000603677 TMEM62Q0P6H9 643 aa26.61■■□□□ 1.85
SSX2IP-209ENST00000603677 BANK1Q8NDB2 785 aa26.61■■□□□ 1.85
SSX2IP-209ENST00000603677 CEP89Q96ST8 783 aa26.61■■□□□ 1.85
SSX2IP-209ENST00000603677 AKT3Q9Y243 479 aa26.61■■□□□ 1.85
SSX2IP-209ENST00000603677 GUCY1B3Q02153 619 aa26.6■■□□□ 1.85
SSX2IP-209ENST00000603677 ANO5Q75V66 913 aa26.6■■□□□ 1.85
SSX2IP-209ENST00000603677 TRMT1LQ7Z2T5 733 aaKnown RBP26.6■■□□□ 1.85
SSX2IP-209ENST00000603677 YME1L1Q96TA2 773 aa26.6■■□□□ 1.85
SSX2IP-209ENST00000603677 CYP26B1Q9NR63 512 aa26.6■■□□□ 1.85
SSX2IP-209ENST00000603677 C1orf112Q9NSG2 853 aa26.6■■□□□ 1.85
SSX2IP-209ENST00000603677 XRCC6P12956 609 aaKnown RBP eCLIP26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 EIF4BP23588 611 aaKnown RBP26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 RFC5P40937 340 aa26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 MTERF2Q49AM1 385 aa26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 SLC7A3Q8WY07 619 aa26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 HSD17B14Q9BPX1 270 aa26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 LXNQ9BS40 222 aa26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 INO80BQ9C086 356 aaPredicted RBP26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 ERVK-5Q9HDB9 667 aa26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 RWDD3Q9Y3V2 267 aa26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 CHD7Q9P2D1 2997 aa26.59■■□□□ 1.85
SSX2IP-209ENST00000603677 LINC01553A4QN01 128 aa26.58■■□□□ 1.85
SSX2IP-209ENST00000603677 FOSBP53539 338 aa26.58■■□□□ 1.85
SSX2IP-209ENST00000603677 NLRP11P59045 1033 aaKnown RBP26.58■■□□□ 1.85
SSX2IP-209ENST00000603677 NCAPH2Q6IBW4 605 aa26.58■■□□□ 1.85
SSX2IP-209ENST00000603677 ZNF410Q86VK4 478 aa26.58■■□□□ 1.85
SSX2IP-209ENST00000603677 NPAS4Q8IUM7 802 aa26.58■■□□□ 1.85
SSX2IP-209ENST00000603677 ADAMTS10Q9H324 1103 aa26.58■■□□□ 1.85
SSX2IP-209ENST00000603677 SUGCTQ9HAC7 445 aa26.58■■□□□ 1.85
SSX2IP-209ENST00000603677 STK24Q9Y6E0 443 aa26.58■■□□□ 1.85
SSX2IP-209ENST00000603677 GTPBP6O43824 516 aaPredicted RBP26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 SLITRK3O94933 977 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 VTNP04004 478 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 MUTP22033 750 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 YWHABP31946 246 aaKnown RBP26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 TXKP42681 527 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 GPC3P51654 580 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 CLCN3P51790 818 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 NFX1Q12986 1120 aaKnown RBP26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 KIZQ2M2Z5 673 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 CRIPAKQ8N1N5 446 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 EIF2AK1Q9BQI3 630 aaKnown RBP26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 DHX33Q9H6R0 707 aaKnown RBP26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 RGS18Q9NS28 235 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 ST3GAL5Q9UNP4 418 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 GINS2Q9Y248 185 aa26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 NOC2LQ9Y3T9 749 aaKnown RBP26.57■■□□□ 1.84
SSX2IP-209ENST00000603677 TRANK1O15050 2925 aa26.56■■□□□ 1.84
SSX2IP-209ENST00000603677 LAD1O00515 517 aa26.56■■□□□ 1.84
SSX2IP-209ENST00000603677 MCM7P33993 719 aa26.56■■□□□ 1.84
SSX2IP-209ENST00000603677 TMCO2Q7Z6W1 182 aaPredicted RBP26.56■■□□□ 1.84
SSX2IP-209ENST00000603677 LRRC71Q8N4P6 559 aa26.56■■□□□ 1.84
SSX2IP-209ENST00000603677 TCP11Q8WWU5 503 aa26.56■■□□□ 1.84
SSX2IP-209ENST00000603677 ZNF689Q96CS4 500 aaPredicted RBP26.56■■□□□ 1.84
SSX2IP-209ENST00000603677 CEP170P1Q96L14 293 aa26.56■■□□□ 1.84
SSX2IP-209ENST00000603677 ANKEF1Q9NU02 776 aa26.56■■□□□ 1.84
SSX2IP-209ENST00000603677 LCHNA4D1U4 455 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 ASAP2O43150 1006 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 UPP2O95045 317 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 TTC38Q5R3I4 469 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 FAM117BQ6P1L5 589 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 SLC24A5Q71RS6 500 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 RTN4RL1Q86UN2 441 aaPredicted RBP26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 SLC17A8Q8NDX2 589 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 TMEM40Q8WWA1 233 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 DYDC2Q96IM9 177 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 OSMRQ99650 979 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 GCOM2Q9BZD3 368 aaPredicted RBP26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 ELAC1Q9H777 363 aaKnown RBP26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 CDHR5Q9HBB8 845 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 TUFT1Q9NNX1 390 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 SMC3Q9UQE7 1217 aa26.55■■□□□ 1.84
SSX2IP-209ENST00000603677 DGKIO75912 1065 aa26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 OR52Z1P0C646 297 aa26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 DARSP14868 501 aaKnown RBP26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 SARSP49591 514 aaKnown RBP26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 ADGRE1Q14246 886 aa26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 ERMNQ8TAM6 284 aa26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 ARNTL2Q8WYA1 636 aa26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 RSPH1Q8WYR4 309 aa26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 RAB34Q9BZG1 259 aa26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 RC3H2Q9HBD1 1191 aaKnown RBP26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 RGL1Q9NZL6 768 aa26.54■■□□□ 1.84
SSX2IP-209ENST00000603677 DENND3A2RUS2 1198 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 CD2BP2O95400 341 aaKnown RBP26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 RB1P06400 928 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 ZSCAN20P17040 1043 aaPredicted RBP26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 GJB2P29033 226 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 POLGP54098 1239 aaPredicted RBP26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 FAM189BP81408 668 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 PDIA5Q14554 519 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 TMEM266Q2M3C6 531 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 RILPL1Q5EBL4 403 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 FAM228AQ86W67 206 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 TPH2Q8IWU9 490 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 TMEM60Q9H2L4 133 aa26.53■■□□□ 1.84
SSX2IP-209ENST00000603677 TMX1Q9H3N1 280 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms