RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GJC2Q5T442 439 aaPredicted RBP19.88■□□□□ 0.77
VRK3-225ENST00000601912 CDKAL1Q5VV42 579 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 DAW1Q8N136 415 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 KIFAP3Q92845 792 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 MRFAP1L1Q96HT8 127 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 FGFBP2Q9BYJ0 223 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 ARHGAP39Q9C0H5 1083 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 THAP9Q9H5L6 903 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 MGAMO43451 1857 aa19.88■□□□□ 0.77
VRK3-225ENST00000601912 EIF3DO15371 548 aaKnown RBP eCLIP19.87■□□□□ 0.77
VRK3-225ENST00000601912 PPFIA4O75335 1185 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 TPM3P06753 285 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 MAPTP10636 758 aaKnown RBP19.87■□□□□ 0.77
VRK3-225ENST00000601912 POLGP54098 1239 aaPredicted RBP19.87■□□□□ 0.77
VRK3-225ENST00000601912 UBASH3AP57075 661 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 PRAMEF19Q5SWL8 479 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 EPM2AIP1Q7L775 607 aaPredicted RBP19.87■□□□□ 0.77
VRK3-225ENST00000601912 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.87■□□□□ 0.77
VRK3-225ENST00000601912 SLC17A8Q8NDX2 589 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 OR6J1Q8NGC5 347 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 AFG1LQ8WV93 481 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 SRRTQ9BXP5 876 aaKnown RBP19.87■□□□□ 0.77
VRK3-225ENST00000601912 IFNKQ9P0W0 207 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 PCDHB13Q9Y5F0 798 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 ZNF865P0CJ78 1059 aaPredicted RBP19.87■□□□□ 0.77
VRK3-225ENST00000601912 MYBP10242 640 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 RFC5P40937 340 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 CASP5P51878 434 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 KNOP1Q1ED39 458 aaKnown RBP19.87■□□□□ 0.77
VRK3-225ENST00000601912 ZNF720Q7Z2F6 126 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 FAM114A1Q8IWE2 563 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 NELFCDQ8IXH7 590 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 ZNF507Q8TCN5 953 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 ATP8B4Q8TF62 1192 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 SLC7A3Q8WY07 619 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 CTAGE1Q96RT6 745 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 DUSP9Q99956 384 aaKnown RBP19.87■□□□□ 0.77
VRK3-225ENST00000601912 C17orf75Q9HAS0 396 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 ERAP1Q9NZ08 941 aa19.87■□□□□ 0.77
VRK3-225ENST00000601912 MAGEC2Q9UBF1 373 aaPredicted RBP19.87■□□□□ 0.77
VRK3-225ENST00000601912 MARK3P27448 753 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 CDC25BP30305 580 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 NMT1P30419 496 aaKnown RBP19.86■□□□□ 0.77
VRK3-225ENST00000601912 FLT3LGP49771 235 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 ALCAMQ13740 583 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 BMT2Q1RMZ1 405 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 MFSD14CQ5VZR4 134 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 PPP4R3CPQ6ZMV5 832 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 TRIM50Q86XT4 487 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 DRC7Q8IY82 874 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 EXOC8Q8IYI6 725 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 PDLIM7Q9NR12 457 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 NRBP1Q9UHY1 535 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 KCNG1Q9UIX4 513 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 UBE4BO95155 1302 aa19.86■□□□□ 0.77
VRK3-225ENST00000601912 MYH11P35749 1972 aa19.85■□□□□ 0.77
VRK3-225ENST00000601912 PRPF6O94906 941 aaKnown RBP19.85■□□□□ 0.77
VRK3-225ENST00000601912 IGHA2P01877 340 aa19.85■□□□□ 0.77
VRK3-225ENST00000601912 HOXD10P28358 340 aa19.85■□□□□ 0.77
VRK3-225ENST00000601912 SMTNP53814 917 aa19.85■□□□□ 0.77
VRK3-225ENST00000601912 DMP1Q13316 513 aaPredicted RBP19.85■□□□□ 0.77
VRK3-225ENST00000601912 EMC2Q15006 297 aa19.85■□□□□ 0.77
VRK3-225ENST00000601912 FIZ1Q96SL8 496 aa19.85■□□□□ 0.77
VRK3-225ENST00000601912 XPO4Q9C0E2 1151 aaKnown RBP19.85■□□□□ 0.77
VRK3-225ENST00000601912 DHX33Q9H6R0 707 aaKnown RBP19.85■□□□□ 0.77
VRK3-225ENST00000601912 GPRC5CQ9NQ84 441 aa19.85■□□□□ 0.77
VRK3-225ENST00000601912 FAM184BQ9ULE4 1060 aa19.85■□□□□ 0.77
VRK3-225ENST00000601912 GABRQQ9UN88 632 aa19.85■□□□□ 0.77
VRK3-225ENST00000601912 KCNJ18B7U540 433 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 K7ENM7 598 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 LGALS2P05162 132 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 PTGS1P23219 599 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 EEF1GP26641 437 aaKnown RBP19.84■□□□□ 0.77
VRK3-225ENST00000601912 RTP1P59025 263 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 KCNJ12Q14500 433 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 PLCB4Q15147 1175 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 TARBP2Q15633 366 aaKnown RBP19.84■□□□□ 0.77
VRK3-225ENST00000601912 DGKDQ16760 1214 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 TCP11X2Q5H9J9 407 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 CREBRFQ8IUR6 639 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 KCTD10Q9H3F6 313 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 ZNF215Q9UL58 517 aaPredicted RBP19.84■□□□□ 0.77
VRK3-225ENST00000601912 TRPC6Q9Y210 931 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 GOLGA6L6A8MZA4 724 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 DYNC1LI2O43237 492 aaPredicted RBP19.84■□□□□ 0.77
VRK3-225ENST00000601912 HBP1O60381 514 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 PTMAP06454 111 aaKnown RBP19.84■□□□□ 0.77
VRK3-225ENST00000601912 PEX3P56589 373 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 HTRA3P83110 453 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 FKBP3Q00688 224 aaKnown RBP19.84■□□□□ 0.77
VRK3-225ENST00000601912 PRKCZQ05513 592 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 FILIP1LQ4L180 1135 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 ZCWPW2Q504Y3 356 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 IFT74Q96LB3 600 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 XPNPEP1Q9NQW7 623 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 GNEQ9Y223 722 aaKnown RBP19.84■□□□□ 0.77
VRK3-225ENST00000601912 ARID2Q68CP9 1835 aa19.84■□□□□ 0.77
VRK3-225ENST00000601912 PDXKO00764 312 aa19.83■□□□□ 0.76
VRK3-225ENST00000601912 CALUO43852 315 aaPredicted RBP19.83■□□□□ 0.76
VRK3-225ENST00000601912 MMP3P08254 477 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms