RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 TTC13Q8NBP0 860 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ADA2Q9NZK5 511 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 GMEB1Q9Y692 573 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ALCAMQ13740 583 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ARPP21Q9UBL0 812 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ABCE1P61221 599 aaKnown RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-218ENST00000601538 CYB5D1Q6P9G0 228 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 CYP26B1Q9NR63 512 aa13.04□□□□□ -0.32
SHANK2-218ENST00000601538 ARMCX6Q7L4S7 300 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 MAGEB5Q9BZ81 275 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-218ENST00000601538 THAP9Q9H5L6 903 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 UBN1Q9NPG3 1134 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 TIMMDC1Q9NPL8 285 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
SHANK2-218ENST00000601538 ZNF521Q96K83 1311 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 ENC1O14682 589 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 SOX6P35712 828 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 NDUFA8P51970 172 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 TNNI3KQ59H18 835 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 NLRP9Q7RTR0 991 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 UHMK1Q8TAS1 419 aaKnown RBP13.03□□□□□ -0.32
SHANK2-218ENST00000601538 DDX25Q9UHL0 483 aaKnown RBP13.03□□□□□ -0.32
SHANK2-218ENST00000601538 LZTS1Q9Y250 596 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 PCDHB4Q9Y5E5 795 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 FPGT-TNNI3KV9GXZ4 949 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 XPAP23025 273 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-218ENST00000601538 CATSPER3Q86XQ3 398 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 DDHD1Q8NEL9 900 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 RSPH1Q8WYR4 309 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 SLITRK6Q9H5Y7 841 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 NFU1Q9UMS0 254 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 VHLP40337 213 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 ARL13BQ3SXY8 428 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 CEP95Q96GE4 821 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 MMS19Q96T76 1030 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 ABCC1P33527 1531 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 CLASP2O75122 1294 aaKnown RBP13.03□□□□□ -0.32
SHANK2-218ENST00000601538 TP53BP2Q13625 1128 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 EGFL6Q8IUX8 553 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 CCDC103Q8IW40 242 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 FAM161BQ96MY7 647 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 SIKE1Q9BRV8 207 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 EDEM3Q9BZQ6 932 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 CPSF3Q9UKF6 684 aaKnown RBP13.03□□□□□ -0.32
SHANK2-218ENST00000601538 M0R3G1 203 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 PRPF18Q99633 342 aaKnown RBP13.03□□□□□ -0.32
SHANK2-218ENST00000601538 SLCO1A2P46721 670 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 PKD2L1Q9P0L9 805 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 ARIH1Q9Y4X5 557 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-218ENST00000601538 PCDHA13Q9Y5I0 950 aa13.03□□□□□ -0.32
SHANK2-218ENST00000601538 HDLBPQ00341 1268 aaKnown RBP13.02□□□□□ -0.32
SHANK2-218ENST00000601538 PREPLQ4J6C6 727 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-218ENST00000601538 PASD1Q8IV76 773 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 HACD3Q9P035 362 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 FRMPD1Q5SYB0 1578 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 GGPS1O95749 300 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 MDH1P40925 334 aaKnown RBP13.02□□□□□ -0.32
SHANK2-218ENST00000601538 LRRC63Q05C16 580 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 RBL2Q08999 1139 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 DMC1Q14565 340 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 NAIF1Q69YI7 327 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-218ENST00000601538 DNAJC24Q6P3W2 148 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 DYTNA2CJ06 578 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 KRT1P04264 644 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 TMOD1P28289 359 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 MECOMQ03112 1051 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 ZNF658Q5TYW1 1059 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-218ENST00000601538 NAA35Q5VZE5 725 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 CCDC127Q96BQ5 260 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 FOXP3Q9BZS1 431 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 CD209Q9NNX6 404 aa13.02□□□□□ -0.32
SHANK2-218ENST00000601538 MROH5Q6ZUA9 1318 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 NDUFAF2Q8N183 169 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 BHMTQ93088 406 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 QRICH2Q9H0J4 1663 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 CHD4Q14839 1912 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 PJA2O43164 708 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 PRDM1O75626 825 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 POLR2EP19388 210 aaKnown RBP13.02□□□□□ -0.33
SHANK2-218ENST00000601538 SERPINB3P29508 390 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 KDM7AQ6ZMT4 941 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 TAGAPQ8N103 731 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 ANKRD36BP1Q96IX9 119 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
SHANK2-218ENST00000601538 TMCO1Q9UM00 188 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 DDAH1O94760 285 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 WWP1Q9H0M0 922 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 PITPNM2Q9BZ72 1349 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 FAM83GA6ND36 823 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 DSG1Q02413 1049 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 CCDC87Q9NVE4 849 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 SLC5A4Q9NY91 659 aa13.02□□□□□ -0.33
SHANK2-218ENST00000601538 FLT4P35916 1363 aa13.01□□□□□ -0.33
SHANK2-218ENST00000601538 ZBED4O75132 1171 aa13.01□□□□□ -0.33
SHANK2-218ENST00000601538 ME3Q16798 604 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms