RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 UPP2O95045 317 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 GGPS1O95749 300 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 MYL7Q01449 175 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 PPM1KQ8N3J5 372 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 LRRN2O75325 713 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 VPS41P49754 854 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 FAM83AQ86UY5 434 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 SGMS1Q86VZ5 419 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 TMEM206Q9H813 350 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 CPT1AP50416 773 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 TNFAIP2Q03169 654 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 PPM1EQ8WY54 764 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 FBXO28Q9NVF7 368 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 MRFAP1Q9Y605 127 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 SYNJ2BP-COX16A0A087WUM0 186 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 HEXIM1O94992 359 aaKnown RBP11.98□□□□□ -0.49
ZNF558-207ENST00000601372 AFPP02771 609 aaKnown RBP11.98□□□□□ -0.49
ZNF558-207ENST00000601372 COX16Q9P0S2 106 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 CAPN7Q9Y6W3 813 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 ATP2A1O14983 1001 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 PGK2P07205 417 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 ARL6IP4Q66PJ3 421 aaKnown RBP11.98□□□□□ -0.49
ZNF558-207ENST00000601372 CAPN12Q6ZSI9 719 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 GCOM2Q9BZD3 368 aaPredicted RBP11.98□□□□□ -0.49
ZNF558-207ENST00000601372 MED4Q9NPJ6 270 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 TRIM10Q9UDY6 481 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 PCDHB4Q9Y5E5 795 aa11.98□□□□□ -0.49
ZNF558-207ENST00000601372 MAPK4P31152 587 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 BFSP1Q12934 665 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 RUFY4Q6ZNE9 571 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 GCNAQ96QF7 691 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 FAM184BQ9ULE4 1060 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 ZBED6P86452 979 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 GOLGA8IPA6NC78 632 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 GOLGA8JA6NMD2 632 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 TAB3Q8N5C8 712 aaPredicted RBP11.97□□□□□ -0.49
ZNF558-207ENST00000601372 KCNB2Q92953 911 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 STK17AQ9UEE5 414 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 LMO7Q8WWI1 1683 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 TBC1D8O95759 1140 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 ZBTB16Q05516 673 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 FAM117BQ6P1L5 589 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 FUCA2Q9BTY2 467 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 EMILIN3Q9NT22 766 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 NKIRAS1Q9NYS0 192 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 GCNT4Q9P109 453 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 ANKRD65E5RJM6 399 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 GAS8O95995 478 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 VCAM1P19320 739 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 MYO1EQ12965 1108 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 MTMR3Q13615 1198 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 TSNARE1Q96NA8 513 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
ZNF558-207ENST00000601372 EFCC1Q9HA90 598 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 NXF1Q9UBU9 619 aaKnown RBP11.97□□□□□ -0.49
ZNF558-207ENST00000601372 TTLL3Q9Y4R7 772 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 ADGRG1Q9Y653 693 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 BCL9LQ86UU0 1499 aa11.97□□□□□ -0.49
ZNF558-207ENST00000601372 PEAK1Q9H792 1746 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 QARSP47897 775 aaKnown RBP11.96□□□□□ -0.49
ZNF558-207ENST00000601372 HNRNPH2P55795 449 aaKnown RBP11.96□□□□□ -0.49
ZNF558-207ENST00000601372 GABPAQ06546 454 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 TMEM62Q0P6H9 643 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 MAPK6Q16659 721 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 THNSL1Q8IYQ7 743 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 NSMCE1Q8WV22 266 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 PSPC1Q8WXF1 523 aaKnown RBP11.96□□□□□ -0.49
ZNF558-207ENST00000601372 DDX12PQ92771 950 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 PHF20Q9BVI0 1012 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 FAM208AQ9UK61 1670 aaKnown RBP11.96□□□□□ -0.49
ZNF558-207ENST00000601372 NPHP3-ACAD11A0A0J9YXS1 232 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 LRRC53A6NM62 1247 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 CCDC6Q16204 474 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 CABS1Q96KC9 395 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 SLIT2O94813 1529 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 LGALS16A8MUM7 142 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 PSMC2P35998 433 aaKnown RBP11.96□□□□□ -0.49
ZNF558-207ENST00000601372 STAT5BP51692 787 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 ENGASEQ8NFI3 743 aa11.96□□□□□ -0.49
ZNF558-207ENST00000601372 POLR3FQ9H1D9 316 aaPredicted RBP11.96□□□□□ -0.49
ZNF558-207ENST00000601372 RRP15Q9Y3B9 282 aaKnown RBP11.96□□□□□ -0.49
ZNF558-207ENST00000601372 TMEM88BA6NKF7 163 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 ZNF185O15231 689 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 ATP8B1O43520 1251 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 TDP2O95551 362 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 ATP1A1P05023 1023 aaKnown RBP11.96□□□□□ -0.5
ZNF558-207ENST00000601372 VGLL4Q14135 290 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 SCYL2Q6P3W7 929 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 FBF1Q8TES7 1133 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 FAM20AQ96MK3 541 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 LXNQ9BS40 222 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 RAB17Q9H0T7 212 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 WTIPA6NIX2 430 aaPredicted RBP11.96□□□□□ -0.5
ZNF558-207ENST00000601372 DGKDQ16760 1214 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 ZNF568Q3ZCX4 644 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 ZNF541Q9H0D2 1346 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 TTC26A0AVF1 554 aa11.96□□□□□ -0.5
ZNF558-207ENST00000601372 E9PMD0 336 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms