RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MAFO75444 373 aaPredicted RBP22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 CYP2C9P11712 490 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 SYKP43405 635 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 UBE2HP62256 183 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 MKRN4PQ13434 485 aaPredicted RBP22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 EMC2Q15006 297 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 RINT1Q6NUQ1 792 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 SERINC5Q86VE9 423 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 TOX2Q96NM4 488 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 PDLIM7Q9NR12 457 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 PPME1Q9Y570 386 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 MROH7Q68CQ1 1323 aa22.28■■□□□ 1.16
SHKBP1-222ENST00000600320 MAGEB2O15479 319 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 ACTN4O43707 911 aaKnown RBP22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 RFC5P40937 340 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 CLCN3P51790 818 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 POLGP54098 1239 aaPredicted RBP22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 FAAP100Q0VG06 881 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 EFCAB12Q6NXP0 572 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 C1orf186Q6ZWK4 172 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 FMR1NBQ8N0W7 255 aaPredicted RBP22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 IQUBQ8NA54 791 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 ENGASEQ8NFI3 743 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 STAMQ92783 540 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 MTRQ99707 1265 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 NOD1Q9Y239 953 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 LOXHD1Q8IVV2 1947 aa22.27■■□□□ 1.16
SHKBP1-222ENST00000600320 TLR3O15455 904 aaKnown RBP22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 DGAT1O75907 488 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 CYP11B2P19099 503 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 SNW1Q13573 536 aaKnown RBP22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 TRIM71Q2Q1W2 868 aaKnown RBP22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 LONRF3Q496Y0 759 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 ARSHQ5FYA8 562 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 MAEAQ7L5Y9 396 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 GPBP1Q86WP2 473 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 METTL13Q8N6R0 699 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 FAM49AQ9H0Q0 323 aaPredicted RBP22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 SUGCTQ9HAC7 445 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 ATP6V0A4Q9HBG4 840 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 POLD4Q9HCU8 107 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 GPRC5CQ9NQ84 441 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 EVPLQ92817 2033 aa22.26■■□□□ 1.15
SHKBP1-222ENST00000600320 NPHP3-ACAD11A0A0J9YXS1 232 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 SMIM35A0A1B0GVV1 85 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 DCDC2CA8MYV0 355 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 RBAK-RBAKDNI3L0D1 243 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 ZNF202O95125 648 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 PTK7Q13308 1070 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 KIAA0319LQ8IZA0 1049 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 DNAJB3Q8WWF6 145 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 SLC7A3Q8WY07 619 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 TMEM143Q96AN5 459 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 PYM1Q9BRP8 204 aaKnown RBP22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 CUEDC2Q9H467 287 aa22.25■■□□□ 1.15
SHKBP1-222ENST00000600320 TNRC18O15417 2968 aaPredicted RBP22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 MYMKA6NI61 221 aa22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 NR1I2O75469 434 aa22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 MCM4P33991 863 aa22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 FAM160A1Q05DH4 1040 aa22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 TAF2Q6P1X5 1199 aa22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 SV2BQ7L1I2 683 aa22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 SH3RF1Q7Z6J0 888 aa22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 GRAMD1CQ8IYS0 662 aa22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 KBTBD4Q9NVX7 518 aa22.24■■□□□ 1.15
SHKBP1-222ENST00000600320 CLTBP09497 229 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 SLFN14P0C7P3 912 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 CACNB1Q02641 598 aaPredicted RBP22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 RAD51AP2Q09MP3 1159 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 MAPK7Q13164 816 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 KRBA2Q6ZNG9 492 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 DAW1Q8N136 415 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 RETREG2Q8NC44 543 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 JPH2Q9BR39 696 aaPredicted RBP22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 HTATIP2Q9BUP3 242 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 PCDH10Q9P2E7 1040 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 USP25Q9UHP3 1055 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 TBX21Q9UL17 535 aa22.23■■□□□ 1.15
SHKBP1-222ENST00000600320 RSPH10B2B2RC85 870 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 GOLGA6L22H0YM25 854 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 VTNP04004 478 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 RSPH10BP0C881 870 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 GUCY2CP25092 1073 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 ARL2P36404 184 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 CEP57L1Q8IYX8 460 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 MCPH1Q8NEM0 835 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 POLR3FQ9H1D9 316 aaPredicted RBP22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 TNMDQ9H2S6 317 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 SUCLA2Q9P2R7 463 aaPredicted RBP22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 UMODL1Q5DID0 1318 aa22.22■■□□□ 1.15
SHKBP1-222ENST00000600320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 GAS2O43903 313 aaKnown RBP22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 HIP1RO75146 1068 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 CASP1P29466 404 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 AFMP43652 599 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 TMEM62Q0P6H9 643 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 GIT2Q14161 759 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 FAM102BQ5T8I3 360 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 IER5Q5VY09 327 aa22.21■■□□□ 1.15
SHKBP1-222ENST00000600320 TRAF7Q6Q0C0 670 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms