RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 MAFO75444 373 aaPredicted RBP18.58■□□□□ 0.56
USHBP1-210ENST00000600286 ADAM17P78536 824 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 FAAP100Q0VG06 881 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 ECM1Q16610 540 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 TMEM119Q4V9L6 283 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 SHC4Q6S5L8 630 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 USP49Q70CQ1 688 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 SERINC5Q86VE9 423 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 C7orf61Q8IZ16 206 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 PDILTQ8N807 584 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 MCPH1Q8NEM0 835 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 MRPS27Q92552 414 aaKnown RBP18.58■□□□□ 0.56
USHBP1-210ENST00000600286 PNMA5Q96PV4 448 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 CUEDC2Q9H467 287 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 ATP6V0A4Q9HBG4 840 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 KCNH3Q9ULD8 1083 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 COL6A3P12111 3177 aa18.58■□□□□ 0.56
USHBP1-210ENST00000600286 A0A087WWV3 80 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 TMEM150BA6NC51 233 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 ZBTB42B2RXF5 422 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 ZBTB39O15060 712 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 C22orf31O95567 290 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 PLA2G4BP0C869 781 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 AMPD3Q01432 767 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 MARCH8Q5T0T0 291 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 IER5Q5VY09 327 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 PADI6Q6TGC4 694 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 SV2BQ7L1I2 683 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 CEP57L1Q8IYX8 460 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 LARP4BQ92615 738 aaKnown RBP18.57■□□□□ 0.56
USHBP1-210ENST00000600286 MTRQ99707 1265 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 GDF15Q99988 308 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 SH2D3AQ9BRG2 576 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 FAM49AQ9H0Q0 323 aaPredicted RBP18.57■□□□□ 0.56
USHBP1-210ENST00000600286 HIPK3Q9H422 1215 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 KCND2Q9NZV8 630 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 USP25Q9UHP3 1055 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 AKT3Q9Y243 479 aa18.57■□□□□ 0.56
USHBP1-210ENST00000600286 MYH9P35579 1960 aaKnown RBP18.56■□□□□ 0.56
USHBP1-210ENST00000600286 USO1O60763 962 aaKnown RBP18.56■□□□□ 0.56
USHBP1-210ENST00000600286 KRT18P05783 430 aaKnown RBP18.56■□□□□ 0.56
USHBP1-210ENST00000600286 RAG1P15918 1043 aa18.56■□□□□ 0.56
USHBP1-210ENST00000600286 THPOP40225 353 aa18.56■□□□□ 0.56
USHBP1-210ENST00000600286 SYT2Q8N9I0 419 aaPredicted RBP18.56■□□□□ 0.56
USHBP1-210ENST00000600286 FSIP1Q8NA03 581 aa18.56■□□□□ 0.56
USHBP1-210ENST00000600286 RAD54LQ92698 747 aa18.56■□□□□ 0.56
USHBP1-210ENST00000600286 TIPINQ9BVW5 301 aa18.56■□□□□ 0.56
USHBP1-210ENST00000600286 DHX33Q9H6R0 707 aaKnown RBP18.56■□□□□ 0.56
USHBP1-210ENST00000600286 LTBP2Q14767 1821 aa18.56■□□□□ 0.56
USHBP1-210ENST00000600286 MYH15Q9Y2K3 1946 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 A0A1W2PPC1 479 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 PITPNM1O00562 1244 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 POLR2DO15514 142 aaKnown RBP18.55■□□□□ 0.56
USHBP1-210ENST00000600286 ASAP2O43150 1006 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 PARNO95453 639 aaKnown RBP18.55■□□□□ 0.56
USHBP1-210ENST00000600286 CYP11B2P19099 503 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 SYKP43405 635 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 DHX8Q14562 1220 aaKnown RBP18.55■□□□□ 0.56
USHBP1-210ENST00000600286 EMC2Q15006 297 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 CLEC17AQ6ZS10 378 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 RPAINQ86UA6 219 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 DNAJB3Q8WWF6 145 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 PSPC1Q8WXF1 523 aaKnown RBP18.55■□□□□ 0.56
USHBP1-210ENST00000600286 DHX58Q96C10 678 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 MAGEF1Q9HAY2 307 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 SUCLA2Q9P2R7 463 aaPredicted RBP18.55■□□□□ 0.56
USHBP1-210ENST00000600286 KCNG1Q9UIX4 513 aa18.55■□□□□ 0.56
USHBP1-210ENST00000600286 A0A1B0GVL5 298 aa18.54■□□□□ 0.56
USHBP1-210ENST00000600286 KIAA0355O15063 1070 aa18.54■□□□□ 0.56
USHBP1-210ENST00000600286 PFKFB1P16118 471 aa18.54■□□□□ 0.56
USHBP1-210ENST00000600286 BMP8BP34820 402 aa18.54■□□□□ 0.56
USHBP1-210ENST00000600286 HIC1Q14526 733 aa18.54■□□□□ 0.56
USHBP1-210ENST00000600286 MXD4Q14582 209 aaPredicted RBP18.54■□□□□ 0.56
USHBP1-210ENST00000600286 FAM102BQ5T8I3 360 aa18.54■□□□□ 0.56
USHBP1-210ENST00000600286 SCLT1Q96NL6 688 aa18.54■□□□□ 0.56
USHBP1-210ENST00000600286 LBHD1Q9BQE6 289 aaPredicted RBP18.54■□□□□ 0.56
USHBP1-210ENST00000600286 PDLIM7Q9NR12 457 aa18.54■□□□□ 0.56
USHBP1-210ENST00000600286 IGKV6-21A0A0C4DH24 114 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 RSPH10B2B2RC85 870 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 PRPF40AO75400 957 aaKnown RBP18.53■□□□□ 0.56
USHBP1-210ENST00000600286 TIMP1P01033 207 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 RSPH10BP0C881 870 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 SELPP16109 830 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 CLCN3P51790 818 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 UBE2HP62256 183 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 TFDP1Q14186 410 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 MCM6Q14566 821 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 RINT1Q6NUQ1 792 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 RUFY4Q6ZNE9 571 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 KCNK18Q7Z418 384 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 GPBP1Q86WP2 473 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 KIAA0319LQ8IZA0 1049 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 LRRC71Q8N4P6 559 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 TMEM199Q8N511 208 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 TMEM87AQ8NBN3 555 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 KIFAP3Q92845 792 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 IFT74Q96LB3 600 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 DRC1Q96MC2 740 aa18.53■□□□□ 0.56
USHBP1-210ENST00000600286 NOC4LQ9BVI4 516 aaKnown RBP18.53■□□□□ 0.56
USHBP1-210ENST00000600286 PPP1R12CQ9BZL4 782 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms