RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PRR5-ARHGAP8B1AHC4 643 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 KINO60870 393 aaKnown RBP20.27■□□□□ 0.84
SSBP4-207ENST00000600244 RPS6KA5O75582 802 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 CXCL14O95715 111 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 DCNP07585 359 aaKnown RBP20.27■□□□□ 0.84
SSBP4-207ENST00000600244 ARHGAP8P85298 464 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 TRAF1Q13077 416 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 MCMDC2Q4G0Z9 681 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 PHLDB3Q6NSJ2 640 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 TMC5Q6UXY8 1006 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 TRAPPC12Q8WVT3 735 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 BORCS6Q96GS4 357 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 FAM227BQ96M60 508 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 RTKNQ9BST9 563 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 ST3GAL5Q9UNP4 418 aa20.27■□□□□ 0.84
SSBP4-207ENST00000600244 FAM208BQ5VWN6 2430 aa20.26■□□□□ 0.83
SSBP4-207ENST00000600244 A0A0D9SFI3 127 aa20.26■□□□□ 0.83
SSBP4-207ENST00000600244 SPECC1Q5M775 1068 aa20.26■□□□□ 0.83
SSBP4-207ENST00000600244 CCDC149Q6ZUS6 474 aa20.26■□□□□ 0.83
SSBP4-207ENST00000600244 NLRX1Q86UT6 975 aa20.26■□□□□ 0.83
SSBP4-207ENST00000600244 MAD2L2Q9UI95 211 aa20.26■□□□□ 0.83
SSBP4-207ENST00000600244 SIT1Q9Y3P8 196 aa20.26■□□□□ 0.83
SSBP4-207ENST00000600244 PKD1L2Q7Z442 2459 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
SSBP4-207ENST00000600244 POTEMA6NI47 508 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 TGM1P22735 817 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 DSC3Q14574 896 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 POTEGQ6S5H5 508 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 ZNF589Q86UQ0 364 aaPredicted RBP20.25■□□□□ 0.83
SSBP4-207ENST00000600244 CHAMP1Q96JM3 812 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 PIGSQ96S52 555 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 RIOX1Q9H6W3 641 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 ZSWIM5Q9P217 1185 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 NCDNQ9UBB6 729 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 CDV3Q9UKY7 258 aaKnown RBP20.25■□□□□ 0.83
SSBP4-207ENST00000600244 CA14Q9ULX7 337 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 IRAK3Q9Y616 596 aa20.25■□□□□ 0.83
SSBP4-207ENST00000600244 GPR182O15218 404 aa20.24■□□□□ 0.83
SSBP4-207ENST00000600244 LMNB2Q03252 620 aa20.24■□□□□ 0.83
SSBP4-207ENST00000600244 PLCB4Q15147 1175 aa20.24■□□□□ 0.83
SSBP4-207ENST00000600244 ODR4Q5SWX8 454 aa20.24■□□□□ 0.83
SSBP4-207ENST00000600244 HOMER1Q86YM7 354 aa20.24■□□□□ 0.83
SSBP4-207ENST00000600244 LRRC43Q8N309 656 aa20.24■□□□□ 0.83
SSBP4-207ENST00000600244 RSAD2Q8WXG1 361 aa20.24■□□□□ 0.83
SSBP4-207ENST00000600244 GPRASP2Q96D09 838 aa20.24■□□□□ 0.83
SSBP4-207ENST00000600244 N4BP1O75113 896 aaKnown RBP20.23■□□□□ 0.83
SSBP4-207ENST00000600244 GLULP15104 373 aa20.23■□□□□ 0.83
SSBP4-207ENST00000600244 RFX1P22670 979 aa20.23■□□□□ 0.83
SSBP4-207ENST00000600244 MTHFD1LQ6UB35 978 aa20.23■□□□□ 0.83
SSBP4-207ENST00000600244 CABP7Q86V35 215 aa20.23■□□□□ 0.83
SSBP4-207ENST00000600244 SLC44A3Q8N4M1 653 aa20.23■□□□□ 0.83
SSBP4-207ENST00000600244 TNPO1Q92973 898 aaKnown RBP20.23■□□□□ 0.83
SSBP4-207ENST00000600244 EVI5LQ96CN4 794 aa20.23■□□□□ 0.83
SSBP4-207ENST00000600244 ZBP1Q9H171 429 aa20.23■□□□□ 0.83
SSBP4-207ENST00000600244 GINS2Q9Y248 185 aa20.23■□□□□ 0.83
SSBP4-207ENST00000600244 B4E1Z4 1266 aa20.22■□□□□ 0.83
SSBP4-207ENST00000600244 HOXA2O43364 376 aa20.22■□□□□ 0.83
SSBP4-207ENST00000600244 SRFP11831 508 aa20.22■□□□□ 0.83
SSBP4-207ENST00000600244 BMS1Q14692 1282 aaKnown RBP20.22■□□□□ 0.83
SSBP4-207ENST00000600244 LETM2Q2VYF4 491 aa20.22■□□□□ 0.83
SSBP4-207ENST00000600244 ZNF528Q3MIS6 628 aa20.22■□□□□ 0.83
SSBP4-207ENST00000600244 KIAA0319LQ8IZA0 1049 aa20.22■□□□□ 0.83
SSBP4-207ENST00000600244 AUTS2Q8WXX7 1259 aa20.22■□□□□ 0.83
SSBP4-207ENST00000600244 CDHR1Q96JP9 859 aa20.22■□□□□ 0.83
SSBP4-207ENST00000600244 SFXN1Q9H9B4 322 aa20.22■□□□□ 0.83
SSBP4-207ENST00000600244 BAZ2BQ9UIF8 2168 aaKnown RBP20.21■□□□□ 0.83
SSBP4-207ENST00000600244 PNMA6FA0A0J9YX94 578 aa20.21■□□□□ 0.83
SSBP4-207ENST00000600244 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-207ENST00000600244 SPTLC1O15269 473 aa20.21■□□□□ 0.83
SSBP4-207ENST00000600244 CYTH3O43739 400 aa20.21■□□□□ 0.83
SSBP4-207ENST00000600244 ITGB5P18084 799 aa20.21■□□□□ 0.83
SSBP4-207ENST00000600244 MX1P20591 662 aa20.21■□□□□ 0.83
SSBP4-207ENST00000600244 HDAC1Q13547 482 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-207ENST00000600244 FAM228AQ86W67 206 aa20.21■□□□□ 0.83
SSBP4-207ENST00000600244 VPS52Q8N1B4 723 aa20.21■□□□□ 0.83
SSBP4-207ENST00000600244 SALL3Q9BXA9 1300 aa20.21■□□□□ 0.83
SSBP4-207ENST00000600244 ZNF213O14771 459 aa20.2■□□□□ 0.82
SSBP4-207ENST00000600244 CTSAP10619 480 aa20.2■□□□□ 0.82
SSBP4-207ENST00000600244 KLRC1P26715 233 aa20.2■□□□□ 0.82
SSBP4-207ENST00000600244 CA8P35219 290 aa20.2■□□□□ 0.82
SSBP4-207ENST00000600244 GIT2Q14161 759 aa20.2■□□□□ 0.82
SSBP4-207ENST00000600244 NONOQ15233 471 aaKnown RBP eCLIP20.2■□□□□ 0.82
SSBP4-207ENST00000600244 PLPPR4Q7Z2D5 763 aa20.2■□□□□ 0.82
SSBP4-207ENST00000600244 GPR152Q8TDT2 470 aa20.2■□□□□ 0.82
SSBP4-207ENST00000600244 NT5C1B-RDH14C9J2C7 533 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 POLGP54098 1239 aaPredicted RBP20.19■□□□□ 0.82
SSBP4-207ENST00000600244 CLLU1OSQ5K130 101 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 USP17L6PQ6QN14 398 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 C15orf39Q6ZRI6 1047 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 TICAM2Q86XR7 235 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 PJA1Q8NG27 643 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 NXPE3Q969Y0 559 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 AZI2Q9H6S1 392 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 ARHGEF3Q9NR81 526 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 EPS15L1Q9UBC2 864 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 FBXO4Q9UKT5 387 aa20.19■□□□□ 0.82
SSBP4-207ENST00000600244 FASNP49327 2511 aaKnown RBP20.19■□□□□ 0.82
SSBP4-207ENST00000600244 C2orf16Q68DN1 1984 aa20.18■□□□□ 0.82
SSBP4-207ENST00000600244 MEIS2O14770 477 aa20.18■□□□□ 0.82
SSBP4-207ENST00000600244 NEFLP07196 543 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms