RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 RBM47A0AV96 593 aaKnown RBP16.76■□□□□ 0.27
VRK3-218ENST00000600031 HIP1RO75146 1068 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 TCF7P36402 384 aaPredicted RBP16.76■□□□□ 0.27
VRK3-218ENST00000600031 APLP1P51693 650 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 ZNF131P52739 623 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 GJC2Q5T442 439 aaPredicted RBP16.76■□□□□ 0.27
VRK3-218ENST00000600031 SCFD1Q8WVM8 642 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 USP6NLQ92738 828 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 CCDC43Q96MW1 224 aaKnown RBP16.76■□□□□ 0.27
VRK3-218ENST00000600031 GPR20Q99678 358 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 PARVGQ9HBI0 331 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 SLC5A4Q9NY91 659 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 ODF2LQ9ULJ1 636 aa16.76■□□□□ 0.27
VRK3-218ENST00000600031 SLU7O95391 586 aaKnown RBP16.75■□□□□ 0.27
VRK3-218ENST00000600031 SERPINC1P01008 464 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 GAP43P17677 238 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 CDK11BP21127 795 aaKnown RBP16.75■□□□□ 0.27
VRK3-218ENST00000600031 ADCYAP1R1P41586 468 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 DMTNQ08495 405 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 OTUD6AQ7L8S5 288 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 MYCT1Q8N699 235 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 CEP170P1Q96L14 293 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 TRIM47Q96LD4 638 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 SPATA33Q96N06 139 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 FLRT1Q9NZU1 646 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 SEPT9Q9UHD8 586 aaPredicted RBP16.75■□□□□ 0.27
VRK3-218ENST00000600031 GJD2Q9UKL4 321 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 BICDL2A1A5D9 508 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 ALDH1A1P00352 501 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 HOXC6P09630 235 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 MYBP10242 640 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 ZSCAN20P17040 1043 aaPredicted RBP16.75■□□□□ 0.27
VRK3-218ENST00000600031 PPP1R13BQ96KQ4 1090 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 FIZ1Q96SL8 496 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 MRPL44Q9H9J2 332 aaKnown RBP16.75■□□□□ 0.27
VRK3-218ENST00000600031 OLFML3Q9NRN5 406 aa16.75■□□□□ 0.27
VRK3-218ENST00000600031 ZNF215Q9UL58 517 aaPredicted RBP16.75■□□□□ 0.27
VRK3-218ENST00000600031 MYH11P35749 1972 aa16.74■□□□□ 0.27
VRK3-218ENST00000600031 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.74■□□□□ 0.27
VRK3-218ENST00000600031 NOP56O00567 594 aaKnown RBP16.74■□□□□ 0.27
VRK3-218ENST00000600031 TNPO2O14787 897 aaKnown RBP16.74■□□□□ 0.27
VRK3-218ENST00000600031 STAT5BP51692 787 aa16.74■□□□□ 0.27
VRK3-218ENST00000600031 UBASH3AP57075 661 aa16.74■□□□□ 0.27
VRK3-218ENST00000600031 ARHGAP1Q07960 439 aa16.74■□□□□ 0.27
VRK3-218ENST00000600031 XKR3Q5GH77 459 aa16.74■□□□□ 0.27
VRK3-218ENST00000600031 EPM2AIP1Q7L775 607 aaPredicted RBP16.74■□□□□ 0.27
VRK3-218ENST00000600031 IRF2BP1Q8IU81 584 aa16.74■□□□□ 0.27
VRK3-218ENST00000600031 NELFCDQ8IXH7 590 aa16.74■□□□□ 0.27
VRK3-218ENST00000600031 ZNF397Q8NF99 534 aaPredicted RBP16.74■□□□□ 0.27
VRK3-218ENST00000600031 EEF2KMTQ96G04 330 aa16.74■□□□□ 0.27
VRK3-218ENST00000600031 SRRTQ9BXP5 876 aaKnown RBP16.74■□□□□ 0.27
VRK3-218ENST00000600031 PRDM4Q9UKN5 801 aa16.74■□□□□ 0.27
VRK3-218ENST00000600031 OATP04181 439 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 CYP2B6P20813 491 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 NMT1P30419 496 aaKnown RBP16.73■□□□□ 0.27
VRK3-218ENST00000600031 ACVR2BQ13705 512 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 CCL14Q16627 93 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 APTXQ7Z2E3 356 aaKnown RBP16.73■□□□□ 0.27
VRK3-218ENST00000600031 MSL3Q8N5Y2 521 aaKnown RBP16.73■□□□□ 0.27
VRK3-218ENST00000600031 CSGALNACT2Q8N6G5 542 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 AFAP1L1Q8TED9 768 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 ABHD16BQ9H3Z7 469 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 GPRC5CQ9NQ84 441 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 CYP26B1Q9NR63 512 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 ARID2Q68CP9 1835 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 SPDYE4A6NLX3 237 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 LGR5O75473 907 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 GCNT3O95395 438 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 HOXD13P35453 343 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 ARHGAP39Q9C0H5 1083 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 L2HGDHQ9H9P8 463 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 SEL1LQ9UBV2 794 aa16.73■□□□□ 0.27
VRK3-218ENST00000600031 ZHX1Q9UKY1 873 aaPredicted RBP16.73■□□□□ 0.27
VRK3-218ENST00000600031 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
VRK3-218ENST00000600031 NAA30Q147X3 362 aaPredicted RBP16.72■□□□□ 0.27
VRK3-218ENST00000600031 MTERF2Q49AM1 385 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 ZCWPW2Q504Y3 356 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 ODR4Q5SWX8 454 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 FAM160B1Q5W0V3 765 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 TRIM50Q86XT4 487 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 KCTD10Q9H3F6 313 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 INTS13Q9NVM9 706 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 PCNTO95613 3336 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 MGAMO43451 1857 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 ZSWIM8A7E2V4 1837 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 GH1P01241 217 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 SMPD1P17405 629 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 RGS2P41220 211 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 LAMC2Q13753 1193 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 FAM178BQ8IXR5 827 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 ZNF507Q8TCN5 953 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 SOCS4Q8WXH5 440 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 TIPINQ9BVW5 301 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 THAP9Q9H5L6 903 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 AZI2Q9H6S1 392 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 PDLIM7Q9NR12 457 aa16.72■□□□□ 0.27
VRK3-218ENST00000600031 KCNJ18B7U540 433 aa16.71■□□□□ 0.27
VRK3-218ENST00000600031 TBC1D8O95759 1140 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms