RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 CDHR5Q9HBB8 845 aa31.55■■■□□ 2.64
SSBP4-206ENST00000599699 CYP26B1Q9NR63 512 aa31.55■■■□□ 2.64
SSBP4-206ENST00000599699 FOXD4L1Q9NU39 408 aa31.55■■■□□ 2.64
SSBP4-206ENST00000599699 SLITRK3O94933 977 aa31.54■■■□□ 2.64
SSBP4-206ENST00000599699 PDCP20941 246 aa31.54■■■□□ 2.64
SSBP4-206ENST00000599699 NLRP11P59045 1033 aaKnown RBP31.54■■■□□ 2.64
SSBP4-206ENST00000599699 RILPL1Q5EBL4 403 aa31.54■■■□□ 2.64
SSBP4-206ENST00000599699 PPP2R2DQ66LE6 453 aa31.54■■■□□ 2.64
SSBP4-206ENST00000599699 LINC01465Q8N7H1 131 aa31.54■■■□□ 2.64
SSBP4-206ENST00000599699 SCLT1Q96NL6 688 aa31.54■■■□□ 2.64
SSBP4-206ENST00000599699 OSMRQ99650 979 aa31.54■■■□□ 2.64
SSBP4-206ENST00000599699 HSD17B14Q9BPX1 270 aa31.54■■■□□ 2.64
SSBP4-206ENST00000599699 PADI3Q9ULW8 664 aa31.54■■■□□ 2.64
SSBP4-206ENST00000599699 EVPLQ92817 2033 aa31.53■■■□□ 2.64
SSBP4-206ENST00000599699 VPS37CA5D8V6 355 aaPredicted RBP31.53■■■□□ 2.64
SSBP4-206ENST00000599699 CA3P07451 260 aa31.53■■■□□ 2.64
SSBP4-206ENST00000599699 CRYBB1P53674 252 aaPredicted RBP31.53■■■□□ 2.64
SSBP4-206ENST00000599699 PTGDRQ13258 359 aa31.53■■■□□ 2.64
SSBP4-206ENST00000599699 MKRN4PQ13434 485 aaPredicted RBP31.53■■■□□ 2.64
SSBP4-206ENST00000599699 CEP89Q96ST8 783 aa31.53■■■□□ 2.64
SSBP4-206ENST00000599699 JPH2Q9BR39 696 aaPredicted RBP31.53■■■□□ 2.64
SSBP4-206ENST00000599699 GPR32O75388 356 aa31.52■■■□□ 2.64
SSBP4-206ENST00000599699 MAFO75444 373 aaPredicted RBP31.52■■■□□ 2.64
SSBP4-206ENST00000599699 RPS6KA5O75582 802 aa31.52■■■□□ 2.64
SSBP4-206ENST00000599699 GJB5O95377 273 aa31.52■■■□□ 2.64
SSBP4-206ENST00000599699 NFX1Q12986 1120 aaKnown RBP31.52■■■□□ 2.64
SSBP4-206ENST00000599699 XKR9Q5GH70 373 aa31.52■■■□□ 2.64
SSBP4-206ENST00000599699 HSCBQ8IWL3 235 aa31.52■■■□□ 2.64
SSBP4-206ENST00000599699 ERMNQ8TAM6 284 aa31.52■■■□□ 2.64
SSBP4-206ENST00000599699 SLC7A3Q8WY07 619 aa31.52■■■□□ 2.64
SSBP4-206ENST00000599699 INTS4Q96HW7 963 aaKnown RBP31.52■■■□□ 2.64
SSBP4-206ENST00000599699 ZNF668Q96K58 619 aaPredicted RBP31.52■■■□□ 2.64
SSBP4-206ENST00000599699 CCDC43Q96MW1 224 aaKnown RBP31.52■■■□□ 2.64
SSBP4-206ENST00000599699 GUCD1Q96NT3 240 aa31.52■■■□□ 2.64
SSBP4-206ENST00000599699 SIP14410 1827 aa31.52■■■□□ 2.64
SSBP4-206ENST00000599699 LOC101059915A0A1B0GWI6 518 aaPredicted RBP31.51■■■□□ 2.63
SSBP4-206ENST00000599699 ZBTB39O15060 712 aa31.51■■■□□ 2.63
SSBP4-206ENST00000599699 UPP2O95045 317 aa31.51■■■□□ 2.63
SSBP4-206ENST00000599699 POLGP54098 1239 aaPredicted RBP31.51■■■□□ 2.63
SSBP4-206ENST00000599699 EXOC8Q8IYI6 725 aa31.51■■■□□ 2.63
SSBP4-206ENST00000599699 ZNF710Q8N1W2 664 aa31.51■■■□□ 2.63
SSBP4-206ENST00000599699 C4orf32Q8N8J7 132 aa31.51■■■□□ 2.63
SSBP4-206ENST00000599699 ZNF579Q8NAF0 562 aaKnown RBP31.51■■■□□ 2.63
SSBP4-206ENST00000599699 SNX21Q969T3 373 aa31.51■■■□□ 2.63
SSBP4-206ENST00000599699 RAD9AQ99638 391 aa31.51■■■□□ 2.63
SSBP4-206ENST00000599699 NOC2LQ9Y3T9 749 aaKnown RBP31.51■■■□□ 2.63
SSBP4-206ENST00000599699 PPME1Q9Y570 386 aa31.51■■■□□ 2.63
SSBP4-206ENST00000599699 DRP2Q13474 957 aa31.5■■■□□ 2.63
SSBP4-206ENST00000599699 GRIN2CQ14957 1233 aa31.5■■■□□ 2.63
SSBP4-206ENST00000599699 ODR4Q5SWX8 454 aa31.5■■■□□ 2.63
SSBP4-206ENST00000599699 TMEM40Q8WWA1 233 aa31.5■■■□□ 2.63
SSBP4-206ENST00000599699 NLRP7Q8WX94 980 aa31.5■■■□□ 2.63
SSBP4-206ENST00000599699 CDX2Q99626 313 aaPredicted RBP31.5■■■□□ 2.63
SSBP4-206ENST00000599699 FTHL17Q9BXU8 183 aa31.5■■■□□ 2.63
SSBP4-206ENST00000599699 SUCLA2Q9P2R7 463 aaPredicted RBP31.5■■■□□ 2.63
SSBP4-206ENST00000599699 IGKV6-21A0A0C4DH24 114 aa31.49■■■□□ 2.63
SSBP4-206ENST00000599699 ENPP3O14638 875 aa31.49■■■□□ 2.63
SSBP4-206ENST00000599699 RFC5P40937 340 aa31.49■■■□□ 2.63
SSBP4-206ENST00000599699 ADAMTS10Q9H324 1103 aa31.49■■■□□ 2.63
SSBP4-206ENST00000599699 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.49■■■□□ 2.63
SSBP4-206ENST00000599699 BMP2KQ9NSY1 1161 aaPredicted RBP31.49■■■□□ 2.63
SSBP4-206ENST00000599699 GBF1Q92538 1859 aa31.48■■■□□ 2.63
SSBP4-206ENST00000599699 MICAL3Q7RTP6 2002 aa31.48■■■□□ 2.63
SSBP4-206ENST00000599699 LAD1O00515 517 aa31.48■■■□□ 2.63
SSBP4-206ENST00000599699 GPR182O15218 404 aa31.48■■■□□ 2.63
SSBP4-206ENST00000599699 LYPLA2O95372 231 aa31.48■■■□□ 2.63
SSBP4-206ENST00000599699 FXR2P51116 673 aaKnown RBP eCLIP31.48■■■□□ 2.63
SSBP4-206ENST00000599699 GPC3P51654 580 aa31.48■■■□□ 2.63
SSBP4-206ENST00000599699 TOP1MTQ969P6 601 aa31.48■■■□□ 2.63
SSBP4-206ENST00000599699 TUFT1Q9NNX1 390 aa31.48■■■□□ 2.63
SSBP4-206ENST00000599699 ST3GAL5Q9UNP4 418 aa31.48■■■□□ 2.63
SSBP4-206ENST00000599699 CDC42EP1Q00587 391 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 FERMT3Q86UX7 667 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 RHPN2Q8IUC4 686 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 PIGOQ8TEQ8 1089 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 MYLIPQ8WY64 445 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 RAB34Q9BZG1 259 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 ERVK-5Q9HDB9 667 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 ANKEF1Q9NU02 776 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 LRWD1Q9UFC0 647 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 INSL6Q9Y581 213 aa31.47■■■□□ 2.63
SSBP4-206ENST00000599699 LCHNA4D1U4 455 aa31.46■■■□□ 2.63
SSBP4-206ENST00000599699 MED24O75448 989 aa31.46■■■□□ 2.63
SSBP4-206ENST00000599699 SPATA31C1P0DKV0 1188 aa31.46■■■□□ 2.63
SSBP4-206ENST00000599699 BRAPQ7Z569 592 aa31.46■■■□□ 2.63
SSBP4-206ENST00000599699 CATSPER3Q86XQ3 398 aa31.46■■■□□ 2.63
SSBP4-206ENST00000599699 YME1L1Q96TA2 773 aa31.46■■■□□ 2.63
SSBP4-206ENST00000599699 POLR3CQ9BUI4 534 aaPredicted RBP31.46■■■□□ 2.63
SSBP4-206ENST00000599699 DHX33Q9H6R0 707 aaKnown RBP31.46■■■□□ 2.63
SSBP4-206ENST00000599699 A0A087WWV3 80 aa31.45■■■□□ 2.63
SSBP4-206ENST00000599699 HSP90AA1P07900 732 aaKnown RBP31.45■■■□□ 2.63
SSBP4-206ENST00000599699 EIF4BP23588 611 aaKnown RBP31.45■■■□□ 2.63
SSBP4-206ENST00000599699 EMC2Q15006 297 aa31.45■■■□□ 2.63
SSBP4-206ENST00000599699 HAUS3Q68CZ6 603 aa31.45■■■□□ 2.63
SSBP4-206ENST00000599699 DTHD1Q6ZMT9 781 aa31.45■■■□□ 2.63
SSBP4-206ENST00000599699 FAM228AQ86W67 206 aa31.45■■■□□ 2.63
SSBP4-206ENST00000599699 LINC01599Q8WXQ3 324 aa31.45■■■□□ 2.63
SSBP4-206ENST00000599699 TMEM143Q96AN5 459 aa31.45■■■□□ 2.63
SSBP4-206ENST00000599699 TMX1Q9H3N1 280 aa31.45■■■□□ 2.63
SSBP4-206ENST00000599699 PRDM12Q9H4Q4 367 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms