RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 DENND3A2RUS2 1198 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 ENPP3O14638 875 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 ZNF862O60290 1169 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 TXKP42681 527 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 ORC2Q13416 577 aaPredicted RBP15.85■□□□□ 0.13
LIG1-218ENST00000599322 KIZQ2M2Z5 673 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 TCTN1Q2MV58 587 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 FIBCD1Q8N539 461 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 NEK9Q8TD19 979 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 ATXN2LQ8WWM7 1075 aaKnown RBP15.85■□□□□ 0.13
LIG1-218ENST00000599322 SLC7A3Q8WY07 619 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 TNFRSF25Q93038 417 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 INO80BQ9C086 356 aaPredicted RBP15.85■□□□□ 0.13
LIG1-218ENST00000599322 ZSWIM4Q9H7M6 989 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 THEGQ9P2T0 379 aa15.85■□□□□ 0.13
LIG1-218ENST00000599322 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.85■□□□□ 0.13
LIG1-218ENST00000599322 XIRP2A4UGR9 3374 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.84■□□□□ 0.13
LIG1-218ENST00000599322 ZBTB42B2RXF5 422 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 H3BQV1 296 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 VTNP04004 478 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 ZSCAN20P17040 1043 aaPredicted RBP15.84■□□□□ 0.13
LIG1-218ENST00000599322 CLCN3P51790 818 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 NLRP11P59045 1033 aaKnown RBP15.84■□□□□ 0.13
LIG1-218ENST00000599322 UGCGQ16739 394 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 EARS2Q5JPH6 523 aaKnown RBP15.84■□□□□ 0.13
LIG1-218ENST00000599322 B3GNT9Q6UX72 402 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 LRRC71Q8N4P6 559 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 ERMNQ8TAM6 284 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 NLRP7Q8WX94 980 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 TBC1D32Q96NH3 1257 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 ASB2Q96Q27 587 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 TTC12Q9H892 705 aaPredicted RBP15.84■□□□□ 0.13
LIG1-218ENST00000599322 AGO3Q9H9G7 860 aaKnown RBP15.84■□□□□ 0.13
LIG1-218ENST00000599322 C1orf112Q9NSG2 853 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 VAV3Q9UKW4 847 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 RWDD3Q9Y3V2 267 aa15.84■□□□□ 0.13
LIG1-218ENST00000599322 FAM205CA6NFA0 338 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 TNFRSF10AO00220 468 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 MCM7P33993 719 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 TRAPPC10P48553 1259 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 POLGP54098 1239 aaPredicted RBP15.83■□□□□ 0.12
LIG1-218ENST00000599322 ERVK-21P61565 698 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 HTRA4P83105 476 aaPredicted RBP15.83■□□□□ 0.12
LIG1-218ENST00000599322 ST3GAL1Q11201 340 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 TMEM266Q2M3C6 531 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 NPAS4Q8IUM7 802 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 NOSTRINQ8IVI9 506 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 TPH2Q8IWU9 490 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 C4orf19Q8IY42 314 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 MICALL1Q8N3F8 863 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 HAS1Q92839 578 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 CEP170P1Q96L14 293 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 PPP1R16BQ96T49 567 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 OSMRQ99650 979 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 GCOM2Q9BZD3 368 aaPredicted RBP15.83■□□□□ 0.12
LIG1-218ENST00000599322 MTUS1Q9ULD2 1270 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 PCDHB7Q9Y5E2 793 aa15.83■□□□□ 0.12
LIG1-218ENST00000599322 SIP14410 1827 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 MICAL3Q7RTP6 2002 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 NCOR1O75376 2440 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 LCHNA4D1U4 455 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 LINC01553A4QN01 128 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 RFXAPO00287 272 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 EML1O00423 815 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 GAS2O43903 313 aaKnown RBP15.82■□□□□ 0.12
LIG1-218ENST00000599322 ARHGEF15O94989 841 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 IBSPP21815 317 aaPredicted RBP15.82■□□□□ 0.12
LIG1-218ENST00000599322 EIF4BP23588 611 aaKnown RBP15.82■□□□□ 0.12
LIG1-218ENST00000599322 RFC5P40937 340 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 BTG3Q14201 252 aaPredicted RBP15.82■□□□□ 0.12
LIG1-218ENST00000599322 SKIV2LQ15477 1246 aaKnown RBP15.82■□□□□ 0.12
LIG1-218ENST00000599322 MCTP1Q6DN14 999 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 FBXO22Q8NEZ5 403 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 TCP11Q8WWU5 503 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 TMX3Q96JJ7 454 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 LXNQ9BS40 222 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 OSBPL7Q9BZF2 842 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 RAB34Q9BZG1 259 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 CYP26B1Q9NR63 512 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 ST3GAL5Q9UNP4 418 aa15.82■□□□□ 0.12
LIG1-218ENST00000599322 NOC2LQ9Y3T9 749 aaKnown RBP15.82■□□□□ 0.12
LIG1-218ENST00000599322 RBAK-RBAKDNI3L0D1 243 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 MAFO75444 373 aaPredicted RBP15.81■□□□□ 0.12
LIG1-218ENST00000599322 YWHABP31946 246 aaKnown RBP15.81■□□□□ 0.12
LIG1-218ENST00000599322 CYP4A11Q02928 519 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
LIG1-218ENST00000599322 TARBP2Q15633 366 aaKnown RBP15.81■□□□□ 0.12
LIG1-218ENST00000599322 PTPROQ16827 1216 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 XKR9Q5GH70 373 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 TTC38Q5R3I4 469 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 SLC24A5Q71RS6 500 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 DYDC2Q96IM9 177 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 EIF2AK1Q9BQI3 630 aaKnown RBP15.81■□□□□ 0.12
LIG1-218ENST00000599322 ERVK-5Q9HDB9 667 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 LMCD1Q9NZU5 365 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 SUCLA2Q9P2R7 463 aaPredicted RBP15.81■□□□□ 0.12
LIG1-218ENST00000599322 STK24Q9Y6E0 443 aa15.81■□□□□ 0.12
LIG1-218ENST00000599322 EPOPA6NHQ4 379 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms