RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 NCOR1O75376 2440 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 IGKV6-21A0A0C4DH24 114 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 TBX3O15119 743 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 EFCAB12Q6NXP0 572 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 ANO5Q75V66 913 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 FAM228AQ86W67 206 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 ZNF579Q8NAF0 562 aaKnown RBP13.68□□□□□ -0.22
LIG1-217ENST00000599165 OSMRQ99650 979 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 TCEAL9Q9UHQ7 104 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 CEP131Q9UPN4 1083 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 XIRP2A4UGR9 3374 aa13.68□□□□□ -0.22
LIG1-217ENST00000599165 MAGEB2O15479 319 aa13.67□□□□□ -0.22
LIG1-217ENST00000599165 DGKIO75912 1065 aa13.67□□□□□ -0.22
LIG1-217ENST00000599165 CRYBB1P53674 252 aaPredicted RBP13.67□□□□□ -0.22
LIG1-217ENST00000599165 PAK2Q13177 524 aa13.67□□□□□ -0.22
LIG1-217ENST00000599165 XKR3Q5GH77 459 aa13.67□□□□□ -0.22
LIG1-217ENST00000599165 METTL13Q8N6R0 699 aa13.67□□□□□ -0.22
LIG1-217ENST00000599165 ZNF668Q96K58 619 aaPredicted RBP13.67□□□□□ -0.22
LIG1-217ENST00000599165 YME1L1Q96TA2 773 aa13.67□□□□□ -0.22
LIG1-217ENST00000599165 LLPHQ9BRT6 129 aaKnown RBP13.67□□□□□ -0.22
LIG1-217ENST00000599165 COL25A1Q9BXS0 654 aaPredicted RBP13.67□□□□□ -0.22
LIG1-217ENST00000599165 GINS2Q9Y248 185 aa13.67□□□□□ -0.22
LIG1-217ENST00000599165 ADGRA3Q8IWK6 1321 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 M0QZ92 97 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 GATMP50440 423 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 GPC3P51654 580 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 NLRP11P59045 1033 aaKnown RBP13.66□□□□□ -0.22
LIG1-217ENST00000599165 PSMC5P62195 406 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 DSC3Q14574 896 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 MTERF2Q49AM1 385 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 EPC2Q52LR7 807 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 PLA2G4FQ68DD2 849 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 MTMR9Q96QG7 549 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 FTHL17Q9BXU8 183 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 TMEM60Q9H2L4 133 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 NRBP2Q9NSY0 501 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 RGL1Q9NZL6 768 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 SEPT9Q9UHD8 586 aaPredicted RBP13.66□□□□□ -0.22
LIG1-217ENST00000599165 ST3GAL5Q9UNP4 418 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 MUC3AQ02505 3323 aa13.66□□□□□ -0.22
LIG1-217ENST00000599165 PLXNA4Q9HCM2 1894 aa13.65□□□□□ -0.22
LIG1-217ENST00000599165 TCF20Q9UGU0 1960 aaKnown RBP13.65□□□□□ -0.22
LIG1-217ENST00000599165 C9IYK1 514 aa13.65□□□□□ -0.22
LIG1-217ENST00000599165 DLL1O00548 723 aa13.65□□□□□ -0.22
LIG1-217ENST00000599165 ZBTB39O15060 712 aa13.65□□□□□ -0.22
LIG1-217ENST00000599165 RPS6KA5O75582 802 aa13.65□□□□□ -0.22
LIG1-217ENST00000599165 NPEPPSP55786 919 aa13.65□□□□□ -0.22
LIG1-217ENST00000599165 NFX1Q12986 1120 aaKnown RBP13.65□□□□□ -0.22
LIG1-217ENST00000599165 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.22
LIG1-217ENST00000599165 ZSCAN31Q96LW9 406 aaPredicted RBP13.65□□□□□ -0.22
LIG1-217ENST00000599165 NAP1L4Q99733 375 aaKnown RBP13.65□□□□□ -0.22
LIG1-217ENST00000599165 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 MAFO75444 373 aaPredicted RBP13.64□□□□□ -0.23
LIG1-217ENST00000599165 QARSP47897 775 aaKnown RBP13.64□□□□□ -0.23
LIG1-217ENST00000599165 TBC1D8BQ0IIM8 1120 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 RABEP1Q15276 862 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 EPHA7Q15375 998 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 NPAS4Q8IUM7 802 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 FBXO22Q8NEZ5 403 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 FBXO18Q8NFZ0 1043 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 CLP1Q92989 425 aaKnown RBP13.64□□□□□ -0.23
LIG1-217ENST00000599165 DYDC2Q96IM9 177 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 C8orf76Q96K31 380 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 ADAM2Q99965 735 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 HSD17B14Q9BPX1 270 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 LXNQ9BS40 222 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 BRMS1Q9HCU9 246 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
LIG1-217ENST00000599165 RGS18Q9NS28 235 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 AKT3Q9Y243 479 aa13.64□□□□□ -0.23
LIG1-217ENST00000599165 MRPL42Q9Y6G3 142 aaKnown RBP13.64□□□□□ -0.23
LIG1-217ENST00000599165 C5orf67F2Z3F1 127 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 H3BNC9 293 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 CSDE1O75534 798 aaKnown RBP13.63□□□□□ -0.23
LIG1-217ENST00000599165 SLITRK3O94933 977 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 P4HBP07237 508 aaKnown RBP13.63□□□□□ -0.23
LIG1-217ENST00000599165 DARSP14868 501 aaKnown RBP13.63□□□□□ -0.23
LIG1-217ENST00000599165 FGFR4P22455 802 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 EIF4BP23588 611 aaKnown RBP13.63□□□□□ -0.23
LIG1-217ENST00000599165 SARSP49591 514 aaKnown RBP13.63□□□□□ -0.23
LIG1-217ENST00000599165 FAM189BP81408 668 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 TFF2Q03403 129 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 CTTNQ14247 550 aaKnown RBP13.63□□□□□ -0.23
LIG1-217ENST00000599165 NCAPH2Q6IBW4 605 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 KSR1Q8IVT5 923 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 C4orf19Q8IY42 314 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 SLFN12Q8IYM2 578 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 TBC1D32Q96NH3 1257 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 MAP7D2Q96T17 732 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
LIG1-217ENST00000599165 CYP26B1Q9NR63 512 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 LMCD1Q9NZU5 365 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 THEGQ9P2T0 379 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
LIG1-217ENST00000599165 GPR182O15218 404 aa13.62□□□□□ -0.23
LIG1-217ENST00000599165 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
LIG1-217ENST00000599165 NEMFO60524 1076 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms