RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 KLRC1P26715 233 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 HYIQ5T013 277 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 PLA2G4FQ68DD2 849 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 POTEGQ6S5H5 508 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 RUFY4Q6ZNE9 571 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 OTUD6AQ7L8S5 288 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 CAGE1Q8TC20 777 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 HERVK_113Q902F9 699 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 ZBTB10Q96DT7 871 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 CHAMP1Q96JM3 812 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 CSRNP2Q9H175 543 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 HIPK3Q9H422 1215 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 PRDM12Q9H4Q4 367 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 ANKEF1Q9NU02 776 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 MSRAQ9UJ68 235 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 RCOR1Q9UKL0 485 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 PPME1Q9Y570 386 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 PCDHA2Q9Y5H9 948 aa20.31■□□□□ 0.84
LIG1-216ENST00000598938 TRIP12Q14669 1992 aaPredicted RBP20.3■□□□□ 0.84
LIG1-216ENST00000598938 PITPNM1O00562 1244 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 SLC26A4O43511 780 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 XRCC6P12956 609 aaKnown RBP eCLIP20.3■□□□□ 0.84
LIG1-216ENST00000598938 PBX2P40425 430 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 KRT85P78386 507 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 MRPS5P82675 430 aaKnown RBP20.3■□□□□ 0.84
LIG1-216ENST00000598938 MTERF2Q49AM1 385 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 TAF2Q6P1X5 1199 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 ZNF365Q70YC5 407 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 RPAINQ86UA6 219 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 CCDC155Q8N6L0 562 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 ZNF579Q8NAF0 562 aaKnown RBP20.3■□□□□ 0.84
LIG1-216ENST00000598938 KCNG4Q8TDN1 519 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 CLIC6Q96NY7 704 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 NACC1Q96RE7 527 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 IL23AQ9NPF7 189 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 CYP26B1Q9NR63 512 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 CHMP5Q9NZZ3 219 aa20.3■□□□□ 0.84
LIG1-216ENST00000598938 UMODL1Q5DID0 1318 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 KDM3AQ9Y4C1 1321 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 SMIM35A0A1B0GVV1 85 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 MAGEB2O15479 319 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 NPEPPSP55786 919 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 BFSP2Q13515 415 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 CABP7Q86V35 215 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 LINC01465Q8N7H1 131 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 PIGOQ8TEQ8 1089 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 SH2D3AQ9BRG2 576 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 PPP1R12CQ9BZL4 782 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 DBR1Q9UK59 544 aaKnown RBP20.29■□□□□ 0.84
LIG1-216ENST00000598938 KAT6AQ92794 2004 aa20.29■□□□□ 0.84
LIG1-216ENST00000598938 GRXCR1A8MXD5 290 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 CAND2O75155 1236 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 CKBP12277 381 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 UBA7P41226 1012 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 TBC1D8BQ0IIM8 1120 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 GRB10Q13322 594 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 XKR9Q5GH70 373 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 KCTD17Q8N5Z5 321 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 ADAMTS19Q8TE59 1207 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 LEO1Q8WVC0 666 aaPredicted RBP20.28■□□□□ 0.84
LIG1-216ENST00000598938 CEP170P1Q96L14 293 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 PNMA5Q96PV4 448 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 WNT8AQ9H1J5 351 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 DDX19AQ9NUU7 478 aaKnown RBP20.28■□□□□ 0.84
LIG1-216ENST00000598938 KIAA1024Q9UPX6 916 aa20.28■□□□□ 0.84
LIG1-216ENST00000598938 ARID2Q68CP9 1835 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 A0A087WWV3 80 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 IGKV6-21A0A0C4DH24 114 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 CUTAO60888 179 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 MAFO75444 373 aaPredicted RBP20.27■□□□□ 0.84
LIG1-216ENST00000598938 RPLP2P05387 115 aaKnown RBP20.27■□□□□ 0.84
LIG1-216ENST00000598938 NCLP19338 710 aaKnown RBP20.27■□□□□ 0.84
LIG1-216ENST00000598938 CYP2C18P33260 490 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 RFC5P40937 340 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 RARRES1P49788 294 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 TMEM119Q4V9L6 283 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 SPECC1Q5M775 1068 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 TRAF7Q6Q0C0 670 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 USP49Q70CQ1 688 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 EPSTI1Q96J88 318 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 CCSER1Q9C0I3 900 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 NT5C3AQ9H0P0 336 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 DHX33Q9H6R0 707 aaKnown RBP20.27■□□□□ 0.84
LIG1-216ENST00000598938 SLC28A3Q9HAS3 691 aa20.27■□□□□ 0.84
LIG1-216ENST00000598938 CHD7Q9P2D1 2997 aa20.27■□□□□ 0.83
LIG1-216ENST00000598938 FGBP02675 491 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 SELPP16109 830 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 THPOP40225 353 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 ADGRE1Q14246 886 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 AXDND1Q5T1B0 1012 aaPredicted RBP20.26■□□□□ 0.83
LIG1-216ENST00000598938 ZNF618Q5T7W0 954 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 EFCAB12Q6NXP0 572 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 KIAA0319LQ8IZA0 1049 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 RETREG2Q8NC44 543 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 DNAJB3Q8WWF6 145 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 PPM1EQ8WY54 764 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 SPATA32Q96LK8 384 aa20.26■□□□□ 0.83
LIG1-216ENST00000598938 JPH2Q9BR39 696 aaPredicted RBP20.26■□□□□ 0.83
LIG1-216ENST00000598938 SCAND2PQ9GZW5 306 aaPredicted RBP20.26■□□□□ 0.83
LIG1-216ENST00000598938 TSPYL2Q9H2G4 693 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms