RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 GNAQP50148 359 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 METAP2P50579 478 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMG9-207ENST00000598860 SOX10P56693 466 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 IRX3P78415 501 aaPredicted RBP11.97□□□□□ -0.49
SMG9-207ENST00000598860 SETDB1Q15047 1291 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 ASPRV1Q53RT3 343 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 FAM117BQ6P1L5 589 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 CPLX2Q6PUV4 134 aaKnown RBP11.97□□□□□ -0.49
SMG9-207ENST00000598860 MICU3Q86XE3 530 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 LRRC47Q8N1G4 583 aaKnown RBP11.97□□□□□ -0.49
SMG9-207ENST00000598860 ANKRD13CQ8N6S4 541 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 RASGRP4Q8TDF6 673 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 DCAF4Q8WV16 495 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 LPAR1Q92633 364 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 CLEC4MQ9H2X3 399 aaPredicted RBP11.97□□□□□ -0.49
SMG9-207ENST00000598860 TPCN1Q9ULQ1 816 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 NAP1L2Q9ULW6 460 aaPredicted RBP11.97□□□□□ -0.49
SMG9-207ENST00000598860 TLR6Q9Y2C9 796 aa11.97□□□□□ -0.49
SMG9-207ENST00000598860 RLFQ13129 1914 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 COL11A1P12107 1806 aaPredicted RBP11.96□□□□□ -0.49
SMG9-207ENST00000598860 H3BRJ5 948 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 PAGE1O75459 146 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 CDKL5O76039 1030 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 ATF4P18848 351 aaPredicted RBP11.96□□□□□ -0.49
SMG9-207ENST00000598860 CTGFP29279 349 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 GTF2F1P35269 517 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMG9-207ENST00000598860 TROAPQ12815 778 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 GRM4Q14833 912 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 GPATCH4Q5T3I0 446 aaKnown RBP11.96□□□□□ -0.49
SMG9-207ENST00000598860 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 NOL8Q76FK4 1167 aaKnown RBP11.96□□□□□ -0.49
SMG9-207ENST00000598860 NBPF11Q86T75 865 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 CLEC10AQ8IUN9 316 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 SIAH1Q8IUQ4 282 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 ACER1Q8TDN7 264 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 NUP133Q8WUM0 1156 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 GTF3C6Q969F1 213 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 TMX3Q96JJ7 454 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 C12orf42Q96LP6 360 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 P2RX7Q99572 595 aaKnown RBP11.96□□□□□ -0.49
SMG9-207ENST00000598860 VCPKMTQ9H867 229 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 TMEM39AQ9NV64 488 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 SRRDQ9UH36 339 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 PTCH2Q9Y6C5 1203 aa11.96□□□□□ -0.49
SMG9-207ENST00000598860 A0A1W2PRG0 241 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 CPLX1O14810 134 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 PARP1P09874 1014 aaKnown RBP11.95□□□□□ -0.5
SMG9-207ENST00000598860 SNHG28P0DPA3 235 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 PDHBP11177 359 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 ZYXQ15942 572 aaKnown RBP11.95□□□□□ -0.5
SMG9-207ENST00000598860 ME3Q16798 604 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 FAM110CQ1W6H9 321 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 SLC9C1Q4G0N8 1177 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 SLFN13Q68D06 897 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 SHISA2Q6UWI4 295 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 VN1R5Q7Z5H4 357 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 MCF2L2Q86YR7 1114 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 FANCBQ8NB91 859 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 ARMC5Q96C12 935 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 INTS4Q96HW7 963 aaKnown RBP11.95□□□□□ -0.5
SMG9-207ENST00000598860 LZTS2Q9BRK4 669 aa11.95□□□□□ -0.5
SMG9-207ENST00000598860 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
SMG9-207ENST00000598860 F5H6K3 240 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 TNPO2O14787 897 aaKnown RBP11.94□□□□□ -0.5
SMG9-207ENST00000598860 FSCN2O14926 492 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 WDR46O15213 610 aaKnown RBP11.94□□□□□ -0.5
SMG9-207ENST00000598860 NDUFB10O96000 172 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 HSP90AA1P07900 732 aaKnown RBP11.94□□□□□ -0.5
SMG9-207ENST00000598860 SMARCA1P28370 1054 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 SLC1A4P43007 532 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 HERVK_113P62684 666 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 FAM160A1Q05DH4 1040 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 KLRC3Q07444 240 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 PCDH1Q08174 1060 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 CUL4AQ13619 759 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 FBXL19Q6PCT2 694 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 AGMOQ6ZNB7 445 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 MAP4K3Q8IVH8 894 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 RAET1EQ8TD07 263 aa11.94□□□□□ -0.5
SMG9-207ENST00000598860 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.94□□□□□ -0.52e-7■□□□□ 10.9
SMG9-207ENST00000598860 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.94□□□□□ -0.5
SMG9-207ENST00000598860 RBBP6Q7Z6E9 1792 aaKnown RBP11.94□□□□□ -0.5
SMG9-207ENST00000598860 KIAA0100Q14667 2235 aaKnown RBP11.94□□□□□ -0.5
SMG9-207ENST00000598860 MYPNQ86TC9 1320 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 LARGE1O95461 756 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 PF4P02776 101 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 BMP3P12645 472 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 GARTP22102 1010 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 RPS26P62854 115 aaKnown RBP11.93□□□□□ -0.5
SMG9-207ENST00000598860 LMNB2Q03252 620 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 ZNF543Q08ER8 600 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 SCRN1Q12765 414 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 STK3Q13188 491 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 CCDC96Q2M329 555 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 PLA2G4EQ3MJ16 856 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 PCNX4Q63HM2 1172 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 GALNT11Q8NCW6 608 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 GPRC5AQ8NFJ5 357 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 SLC7A3Q8WY07 619 aa11.93□□□□□ -0.5
SMG9-207ENST00000598860 COA7Q96BR5 231 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms