RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 HSD17B14Q9BPX1 270 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 TTYH1Q9H313 450 aaPredicted RBP15.51■□□□□ 0.07
UPF1-205ENST00000598209 CDHR5Q9HBB8 845 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 CYP26B1Q9NR63 512 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.51■□□□□ 0.07
UPF1-205ENST00000598209 YBX2Q9Y2T7 364 aaKnown RBP15.51■□□□□ 0.07
UPF1-205ENST00000598209 PCDHA11Q9Y5I1 949 aa15.51■□□□□ 0.07
UPF1-205ENST00000598209 GPR32O75388 356 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 AMHP03971 560 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 MYOGP15173 224 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 CD52P31358 61 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 KIZQ2M2Z5 673 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 TMEM266Q2M3C6 531 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 OTUD6AQ7L8S5 288 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 TMCO2Q7Z6W1 182 aaPredicted RBP15.5■□□□□ 0.07
UPF1-205ENST00000598209 ZNF579Q8NAF0 562 aaKnown RBP15.5■□□□□ 0.07
UPF1-205ENST00000598209 NKX2-4Q9H2Z4 354 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 SEMA6BQ9H3T3 888 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 MTMR10Q9NXD2 777 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 PPME1Q9Y570 386 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 TTC3P53804 2025 aa15.5■□□□□ 0.07
UPF1-205ENST00000598209 IGKV6-21A0A0C4DH24 114 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.49■□□□□ 0.07
UPF1-205ENST00000598209 LAD1O00515 517 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 ZBTB39O15060 712 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 MAFO75444 373 aaPredicted RBP15.49■□□□□ 0.07
UPF1-205ENST00000598209 LYPLA2O95372 231 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 FXR2P51116 673 aaKnown RBP eCLIP15.49■□□□□ 0.077e-8■■■■□ 20.8
UPF1-205ENST00000598209 CRYBB1P53674 252 aaPredicted RBP15.49■□□□□ 0.07
UPF1-205ENST00000598209 NLRP11P59045 1033 aaKnown RBP15.49■□□□□ 0.07
UPF1-205ENST00000598209 PAK2Q13177 524 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 DRP2Q13474 957 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 XKR9Q5GH70 373 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 MYOCDQ8IZQ8 938 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 TMEM40Q8WWA1 233 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 OSMRQ99650 979 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
UPF1-205ENST00000598209 ZBED2Q9BTP6 218 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 ZNF576Q9H609 170 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 TUFT1Q9NNX1 390 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 PADI3Q9ULW8 664 aa15.49■□□□□ 0.07
UPF1-205ENST00000598209 NOC2LQ9Y3T9 749 aaKnown RBP15.49■□□□□ 0.07
UPF1-205ENST00000598209 TLL1O43897 1013 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 MED24O75448 989 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 RPS6KA5O75582 802 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 GJB5O95377 273 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 SPATA31C1P0DKV0 1188 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 SYT1P21579 422 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 RFC5P40937 340 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 PRPHP41219 470 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 DNM2P50570 870 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 POLGP54098 1239 aaPredicted RBP15.48■□□□□ 0.07
UPF1-205ENST00000598209 FAM117BQ6P1L5 589 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 BRAPQ7Z569 592 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 FERMT3Q86UX7 667 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 EXOC8Q8IYI6 725 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 ZNF710Q8N1W2 664 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 ERMNQ8TAM6 284 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 SLC7A3Q8WY07 619 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 ZNF668Q96K58 619 aaPredicted RBP15.48■□□□□ 0.07
UPF1-205ENST00000598209 POLR3CQ9BUI4 534 aaPredicted RBP15.48■□□□□ 0.07
UPF1-205ENST00000598209 ADAMTS10Q9H324 1103 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 DHX33Q9H6R0 707 aaKnown RBP15.48■□□□□ 0.07
UPF1-205ENST00000598209 ERVK-5Q9HDB9 667 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 ANKEF1Q9NU02 776 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 MYH15Q9Y2K3 1946 aa15.48■□□□□ 0.07
UPF1-205ENST00000598209 GPC3P51654 580 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 ATP2C1P98194 919 aaPredicted RBP15.47■□□□□ 0.07
UPF1-205ENST00000598209 NFX1Q12986 1120 aaKnown RBP15.47■□□□□ 0.07
UPF1-205ENST00000598209 ODR4Q5SWX8 454 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 CATSPER3Q86XQ3 398 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 PIGOQ8TEQ8 1089 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 SCLT1Q96NL6 688 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 GUCD1Q96NT3 240 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 FTHL17Q9BXU8 183 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 RAB34Q9BZG1 259 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 SLC28A3Q9HAS3 691 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
UPF1-205ENST00000598209 SUCLA2Q9P2R7 463 aaPredicted RBP15.47■□□□□ 0.07
UPF1-205ENST00000598209 LRWD1Q9UFC0 647 aa15.47■□□□□ 0.07
UPF1-205ENST00000598209 A0A087WWV3 80 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 ENPP3O14638 875 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 GPR182O15218 404 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 UPP2O95045 317 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 CA3P07451 260 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 RPA1P27694 616 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 PDIA5Q14554 519 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 EMC2Q15006 297 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 IL17AQ16552 155 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 PPP2R2DQ66LE6 453 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 HAUS3Q68CZ6 603 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 DTHD1Q6ZMT9 781 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 FAM228AQ86W67 206 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 RHPN2Q8IUC4 686 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 IGSF22Q8N9C0 903 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 NLRP7Q8WX94 980 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 LINC01599Q8WXQ3 324 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 TOP1MTQ969P6 601 aa15.46■□□□□ 0.07
UPF1-205ENST00000598209 CCDC43Q96MW1 224 aaKnown RBP15.46■□□□□ 0.07
UPF1-205ENST00000598209 RAD9AQ99638 391 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms