RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 TBKBP1A7MCY6 615 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 PRR33A8MZF0 331 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 C9IYK1 514 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 DCXO43602 365 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 ZNF862O60290 1169 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 GPR32O75388 356 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 NRIP1P48552 1158 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 ADAM15Q13444 863 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 SMAD4Q13485 552 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 UGCGQ16739 394 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 ZNF746Q6NUN9 644 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 LRRC71Q8N4P6 559 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 BBXQ8WY36 941 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 MSLNLQ96KJ4 702 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 SLC26A6Q9BXS9 759 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 AGXT2Q9BYV1 514 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 RGS18Q9NS28 235 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 CLEC1BQ9P126 229 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 PRKAG3Q9UGI9 489 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 CD207Q9UJ71 328 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 BARX2Q9UMQ3 279 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 FAM50BQ9Y247 325 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 PCDHB7Q9Y5E2 793 aa13.71□□□□□ -0.21
SOX2-OT-228ENST00000597828 TRIP11Q15643 1979 aa13.71□□□□□ -0.22
SOX2-OT-228ENST00000597828 CCDC196A0A1B0GTZ2 297 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 CHMP2AO43633 222 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 NCK2O43639 380 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 PSAPP07602 524 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 LINC01465Q8N7H1 131 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 CCDC12Q8WUD4 166 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 RNF26Q9BY78 433 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 TBC1D22BQ9NU19 505 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 RNF19AQ9NV58 838 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 MUTYHQ9UIF7 546 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 SAMM50Q9Y512 469 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 PCDHA10Q9Y5I2 948 aa13.7□□□□□ -0.22
SOX2-OT-228ENST00000597828 PER2O15055 1255 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 MSH4O15457 936 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 ALADP13716 330 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 FGFR4P22455 802 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 CIITAP33076 1130 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 PBX3P40426 434 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 CRYBB1P53674 252 aaPredicted RBP13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 ERVFC1P60507 584 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 PRKCEQ02156 737 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 DSC3Q14574 896 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 NAALADL2Q58DX5 795 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 EFCAB12Q6NXP0 572 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 SLC24A5Q71RS6 500 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 SMAP1Q8IYB5 467 aaPredicted RBP13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 EFHBQ8N7U6 833 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 COLGALT1Q8NBJ5 622 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 VN1R2Q8NFZ6 395 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 UNC45AQ9H3U1 944 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 CWH43Q9H720 699 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 C1orf112Q9NSG2 853 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 TYW1Q9NV66 732 aaKnown RBP13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 AKT3Q9Y243 479 aa13.69□□□□□ -0.22
SOX2-OT-228ENST00000597828 TMEM150BA6NC51 233 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 WDR64B1ANS9 1081 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 GPR182O15218 404 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 FGF18O76093 207 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 TDP2O95551 362 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 OATP04181 439 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 GNA11P29992 359 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 PDIA3P30101 505 aaKnown RBP13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 AKAP17AQ02040 695 aaKnown RBP13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 DRP2Q13474 957 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 TOB2Q14106 344 aaPredicted RBP13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 LRRC55Q6ZSA7 311 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 RNF135Q8IUD6 432 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 SMRP1Q8NCR6 262 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 CCDC148Q8NFR7 591 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 CCDC136Q96JN2 1154 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 SH2D3AQ9BRG2 576 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 TLR9Q9NR96 1032 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 DISC1Q9NRI5 854 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 TMEM161AQ9NX61 479 aa13.68□□□□□ -0.22
SOX2-OT-228ENST00000597828 DTNBO60941 627 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 CSDE1O75534 798 aaKnown RBP13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 IFNAR1P17181 557 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 GPC3P51654 580 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 PLPP4Q5VZY2 271 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 MCTP2Q6DN12 878 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 THNSL1Q8IYQ7 743 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 FBXL16Q8N461 479 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 TBCKQ8TEA7 893 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 SLC5A5Q92911 643 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 PPP2R3CQ969Q6 453 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 AIFM3Q96NN9 605 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 MAP7D2Q96T17 732 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 ADAMTS10Q9H324 1103 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 TLE6Q9H808 572 aa13.67□□□□□ -0.22
SOX2-OT-228ENST00000597828 ATP6V0A4Q9HBG4 840 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms