RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 TLDC2A0PJX2 215 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 DENND2CQ68D51 928 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 USP17L2Q6R6M4 530 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 RNF25Q96BH1 459 aaPredicted RBP16.86■□□□□ 0.29
IRF3-219ENST00000597636 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
IRF3-219ENST00000597636 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 AMFRQ9UKV5 643 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 INTUQ9ULD6 942 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 AGAP1Q9UPQ3 857 aa16.86■□□□□ 0.29
IRF3-219ENST00000597636 DR1Q01658 176 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 AGAP11Q8TF27 550 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 PRMT1Q99873 361 aaKnown RBP16.85■□□□□ 0.29
IRF3-219ENST00000597636 MTFR1LQ9H019 292 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 GOPCQ9HD26 462 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 EMILIN3Q9NT22 766 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 ROBO3Q96MS0 1386 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 SCN7AQ01118 1682 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 SPDYE3A6NKU9 549 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 RGS16O15492 202 aaPredicted RBP16.85■□□□□ 0.29
IRF3-219ENST00000597636 VIMP08670 466 aaKnown RBP16.85■□□□□ 0.29
IRF3-219ENST00000597636 ALADP13716 330 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 PON1P27169 355 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 HIBADHP31937 336 aaKnown RBP16.85■□□□□ 0.29
IRF3-219ENST00000597636 IFI35P80217 286 aaPredicted RBP16.85■□□□□ 0.29
IRF3-219ENST00000597636 KLRC3Q07444 240 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 SLMAPQ14BN4 828 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 EXOC3L4Q17RC7 722 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 EDRF1Q3B7T1 1238 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 HERC4Q5GLZ8 1057 aaPredicted RBP16.85■□□□□ 0.29
IRF3-219ENST00000597636 ZNF772Q68DY9 489 aaPredicted RBP16.85■□□□□ 0.29
IRF3-219ENST00000597636 VPS36Q86VN1 386 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 AZI2Q9H6S1 392 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 RGS17Q9UGC6 210 aaPredicted RBP16.85■□□□□ 0.29
IRF3-219ENST00000597636 TRPC6Q9Y210 931 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 DAAM1Q9Y4D1 1078 aa16.85■□□□□ 0.29
IRF3-219ENST00000597636 THSD7AQ9UPZ6 1657 aa16.84■□□□□ 0.29
IRF3-219ENST00000597636 RASA1P20936 1047 aa16.84■□□□□ 0.29
IRF3-219ENST00000597636 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
IRF3-219ENST00000597636 IRX1P78414 480 aaPredicted RBP16.84■□□□□ 0.29
IRF3-219ENST00000597636 ZKSCAN8Q15776 578 aaPredicted RBP16.84■□□□□ 0.29
IRF3-219ENST00000597636 PPP2R5EQ16537 467 aa16.84■□□□□ 0.29
IRF3-219ENST00000597636 NAIF1Q69YI7 327 aaPredicted RBP16.84■□□□□ 0.29
IRF3-219ENST00000597636 ABCF3Q9NUQ8 709 aa16.84■□□□□ 0.29
IRF3-219ENST00000597636 NOP53Q9NZM5 478 aaKnown RBP16.84■□□□□ 0.29
IRF3-219ENST00000597636 TAF1P21675 1872 aa16.84■□□□□ 0.29
IRF3-219ENST00000597636 DDX3XO00571 662 aaKnown RBP eCLIP16.84■□□□□ 0.299e-11■□□□□ 9.6
IRF3-219ENST00000597636 NQO1P15559 274 aaKnown RBP16.84■□□□□ 0.29
IRF3-219ENST00000597636 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
IRF3-219ENST00000597636 NSRP1Q9H0G5 558 aaKnown RBP16.84■□□□□ 0.29
IRF3-219ENST00000597636 TFCP2L1Q9NZI6 479 aa16.84■□□□□ 0.29
IRF3-219ENST00000597636 NARFQ9UHQ1 456 aa16.84■□□□□ 0.29
IRF3-219ENST00000597636 SKAP2O75563 359 aaPredicted RBP16.83■□□□□ 0.29
IRF3-219ENST00000597636 AGTP01019 485 aa16.83■□□□□ 0.29
IRF3-219ENST00000597636 AFPP02771 609 aaKnown RBP16.83■□□□□ 0.29
IRF3-219ENST00000597636 NR2F2P24468 414 aa16.83■□□□□ 0.29
IRF3-219ENST00000597636 GRIK3Q13003 919 aa16.83■□□□□ 0.29
IRF3-219ENST00000597636 C6orf118Q5T5N4 469 aa16.83■□□□□ 0.29
IRF3-219ENST00000597636 BZW1Q7L1Q6 419 aaKnown RBP16.83■□□□□ 0.29
IRF3-219ENST00000597636 COL23A1Q86Y22 540 aaPredicted RBP16.83■□□□□ 0.29
IRF3-219ENST00000597636 DZIP1Q86YF9 867 aaKnown RBP16.83■□□□□ 0.29
IRF3-219ENST00000597636 BRWD3Q6RI45 1802 aa16.83■□□□□ 0.29
IRF3-219ENST00000597636 CNTNAP4Q9C0A0 1308 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 FAM187AA6NFU0 413 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 KIF3CO14782 793 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 PLTPP55058 493 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 KCNJ2P63252 427 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 SLC29A2Q14542 456 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 SF3B3Q15393 1217 aaKnown RBP16.83■□□□□ 0.28
IRF3-219ENST00000597636 FRMD5Q7Z6J6 570 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 ARMCX3Q9UH62 379 aaPredicted RBP16.83■□□□□ 0.28
IRF3-219ENST00000597636 DIS3Q9Y2L1 958 aaKnown RBP16.83■□□□□ 0.28
IRF3-219ENST00000597636 ATAD5Q96QE3 1844 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 SMIM23A6NLE4 172 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 SNX3O60493 162 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 UBOX5O94941 541 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 RARAP10276 462 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 DRG2P55039 364 aaKnown RBP16.83■□□□□ 0.28
IRF3-219ENST00000597636 NCALDP61601 193 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 ZDHHC24Q6UX98 284 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 SH3RF3Q8TEJ3 882 aaPredicted RBP16.83■□□□□ 0.28
IRF3-219ENST00000597636 U2AF1L4Q8WU68 220 aaKnown RBP16.83■□□□□ 0.28
IRF3-219ENST00000597636 GLG1Q92896 1179 aa16.83■□□□□ 0.28
IRF3-219ENST00000597636 CNOT7Q9UIV1 285 aaKnown RBP16.83■□□□□ 0.28
IRF3-219ENST00000597636 NPHP3-ACAD11A0A0J9YXS1 232 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 DDX3YO15523 660 aaKnown RBP16.82■□□□□ 0.28
IRF3-219ENST00000597636 CCNHP51946 323 aaPredicted RBP16.82■□□□□ 0.28
IRF3-219ENST00000597636 GALCP54803 685 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
IRF3-219ENST00000597636 ADCY2Q08462 1091 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 PRPF4BQ13523 1007 aaKnown RBP16.82■□□□□ 0.28
IRF3-219ENST00000597636 KIAA1755Q5JYT7 1200 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 DCAF12L1Q5VU92 463 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 CROCCP2Q86T23 111 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 FBXO25Q8TCJ0 367 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 UBA5Q9GZZ9 404 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 JAG2Q9Y219 1238 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 SNX24Q9Y343 169 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 E9PMD0 336 aa16.82■□□□□ 0.28
IRF3-219ENST00000597636 KIAA0391O15091 583 aaKnown RBP16.82■□□□□ 0.28
IRF3-219ENST00000597636 CALRP27797 417 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms