RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 CELF4Q9BZC1 486 aaKnown RBP18.04■□□□□ 0.48
USHBP1-206ENST00000596436 FAM49AQ9H0Q0 323 aaPredicted RBP18.04■□□□□ 0.48
USHBP1-206ENST00000596436 TMX1Q9H3N1 280 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 AZI2Q9H6S1 392 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 CD207Q9UJ71 328 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 MEIS1O00470 390 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 ARP10275 920 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 SLC26A2P50443 739 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 CLUL1Q15846 466 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 CEP55Q53EZ4 464 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 GALNT17Q6IS24 598 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 NME8Q8N427 588 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 EFHBQ8N7U6 833 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 TRAPPC12Q8WVT3 735 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 CLEC1BQ9P126 229 aa18.03■□□□□ 0.48
USHBP1-206ENST00000596436 FNDC1Q4ZHG4 1894 aaPredicted RBP18.03■□□□□ 0.48
USHBP1-206ENST00000596436 STAG3L1P0CL83 205 aa18.02■□□□□ 0.48
USHBP1-206ENST00000596436 XBP1P17861 261 aa18.02■□□□□ 0.48
USHBP1-206ENST00000596436 STAT5BP51692 787 aa18.02■□□□□ 0.48
USHBP1-206ENST00000596436 PAK2Q13177 524 aa18.02■□□□□ 0.48
USHBP1-206ENST00000596436 ADGRD2Q7Z7M1 963 aa18.02■□□□□ 0.48
USHBP1-206ENST00000596436 KLHL23Q8NBE8 558 aa18.02■□□□□ 0.48
USHBP1-206ENST00000596436 SMRP1Q8NCR6 262 aa18.02■□□□□ 0.48
USHBP1-206ENST00000596436 AGO4Q9HCK5 861 aaKnown RBP18.02■□□□□ 0.48
USHBP1-206ENST00000596436 TRPC6Q9Y210 931 aa18.02■□□□□ 0.48
USHBP1-206ENST00000596436 M0QZ92 97 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 GLP2RO95838 553 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 CIITAP33076 1130 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 ZNF76P36508 570 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 NHLH1Q02575 133 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 TMEM62Q0P6H9 643 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 COASYQ13057 564 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 EARS2Q5JPH6 523 aaKnown RBP18.01■□□□□ 0.47
USHBP1-206ENST00000596436 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 HFE2Q6ZVN8 426 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 NIPA1Q7RTP0 329 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 RNF135Q8IUD6 432 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 TBCKQ8TEA7 893 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 TNFRSF25Q93038 417 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 PPP2R3CQ969Q6 453 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 LENG9Q96B70 501 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 UIMC1Q96RL1 719 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 SDF4Q9BRK5 362 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 ERVK-5Q9HDB9 667 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 MUTYHQ9UIF7 546 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 TECTAO75443 2155 aa18.01■□□□□ 0.47
USHBP1-206ENST00000596436 FAM205CA6NFA0 338 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 CCNE2O96020 404 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 SARSP49591 514 aaKnown RBP18■□□□□ 0.47
USHBP1-206ENST00000596436 MCM2P49736 904 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 KRT76Q01546 638 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 GUCY1B3Q02153 619 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 NR5A1Q13285 461 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 ABHD15Q6UXT9 468 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 ALYREFQ86V81 257 aaKnown RBP18■□□□□ 0.47
USHBP1-206ENST00000596436 PLA2G4DQ86XP0 818 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 POF1BQ8WVV4 589 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 FBXL18Q96ME1 805 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 IGFLR1Q9H665 355 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 COL1A2P08123 1366 aa18■□□□□ 0.47
USHBP1-206ENST00000596436 ZBTB42B2RXF5 422 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 LOC730098B7Z3J9 87 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 MGEA5O60502 916 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 TDP2O95551 362 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 KRT2P35908 639 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 NDUFV1P49821 464 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 GATMP50440 423 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 HMGN5P82970 282 aaKnown RBP17.99■□□□□ 0.47
USHBP1-206ENST00000596436 UBE3AQ05086 875 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 CBX2Q14781 532 aaPredicted RBP17.99■□□□□ 0.47
USHBP1-206ENST00000596436 NONOQ15233 471 aaKnown RBP eCLIP17.99■□□□□ 0.47
USHBP1-206ENST00000596436 INF2Q27J81 1249 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 PAN2Q504Q3 1202 aaKnown RBP17.99■□□□□ 0.47
USHBP1-206ENST00000596436 KRT25Q7Z3Z0 450 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 BMP8AQ7Z5Y6 402 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 KIAA0319LQ8IZA0 1049 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 ATP8B4Q8TF62 1192 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 EDAQ92838 391 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 RGS18Q9NS28 235 aa17.99■□□□□ 0.47
USHBP1-206ENST00000596436 DHX15O43143 795 aaKnown RBP17.98■□□□□ 0.47
USHBP1-206ENST00000596436 HBP1O60381 514 aa17.98■□□□□ 0.47
USHBP1-206ENST00000596436 KLRC1P26715 233 aa17.98■□□□□ 0.47
USHBP1-206ENST00000596436 PRR16Q569H4 304 aa17.98■□□□□ 0.47
USHBP1-206ENST00000596436 PIK3AP1Q6ZUJ8 805 aa17.98■□□□□ 0.47
USHBP1-206ENST00000596436 CCDC60Q8IWA6 550 aaPredicted RBP17.98■□□□□ 0.47
USHBP1-206ENST00000596436 DIS3L2Q8IYB7 885 aaKnown RBP17.98■□□□□ 0.47
USHBP1-206ENST00000596436 TMEM40Q8WWA1 233 aa17.98■□□□□ 0.47
USHBP1-206ENST00000596436 CDHR5Q9HBB8 845 aa17.98■□□□□ 0.47
USHBP1-206ENST00000596436 NOC2LQ9Y3T9 749 aaKnown RBP17.98■□□□□ 0.47
USHBP1-206ENST00000596436 USP34Q70CQ2 3546 aa17.98■□□□□ 0.47
USHBP1-206ENST00000596436 CCDC194A0A1B0GVG4 234 aa17.97■□□□□ 0.47
USHBP1-206ENST00000596436 BTBD18B2RXH4 712 aa17.97■□□□□ 0.47
USHBP1-206ENST00000596436 C9IYK1 514 aa17.97■□□□□ 0.47
USHBP1-206ENST00000596436 ATP4AP20648 1035 aa17.97■□□□□ 0.47
USHBP1-206ENST00000596436 NRIP1P48552 1158 aa17.97■□□□□ 0.47
USHBP1-206ENST00000596436 USP11P51784 963 aa17.97■□□□□ 0.47
USHBP1-206ENST00000596436 SETQ01105 290 aaPredicted RBP17.97■□□□□ 0.47
USHBP1-206ENST00000596436 TRIM29Q14134 588 aa17.97■□□□□ 0.47
USHBP1-206ENST00000596436 TMEM266Q2M3C6 531 aa17.97■□□□□ 0.47
USHBP1-206ENST00000596436 C8orf76Q96K31 380 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms