RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365		M0QZ92	97 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	OPLAH	O14841	1288 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	STAM2	O75886	525 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	EOMES	O95936	686 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	MS4A1	P11836	297 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	LAG3	P18627	525 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	RFX1	P22670	979 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	PLCB3	Q01970	1234 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	ALX1	Q15699	326 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	ASPRV1	Q53RT3	343 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	ATAT1	Q5SQI0	421 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	TSHZ3	Q63HK5	1081 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	KIAA1841	Q6NSI8	718 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	RIN2	Q8WYP3	895 aa	Predicted RBP	9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	ACSF2	Q96CM8	615 aa	Predicted RBP	9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	AMN	Q9BXJ7	453 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	ZBTB40	Q9NUA8	1239 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	TYW1	Q9NV66	732 aa	Known RBP	9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	DUSP12	Q9UNI6	340 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	PCDHA1	Q9Y5I3	950 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	HCFC2	Q9Y5Z7	792 aa		9.81	□□□□□ -0.84
LINC00649-208	ENST00000596365	SPATA31C2	B4DYI2	1134 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	SP9	P0CG40	484 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	AR	P10275	920 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	PC	P11498	1178 aa	Known RBP	9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	IBSP	P21815	317 aa	Predicted RBP	9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	HOXA13	P31271	388 aa	Predicted RBP	9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	ATXN1	P54253	815 aa	Known RBP	9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	KRT17	Q04695	432 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	TBC1D8B	Q0IIM8	1120 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	SMC1A	Q14683	1233 aa	Known RBP	9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	GRIK4	Q16099	956 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	RARS2	Q5T160	578 aa	Known RBP	9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	TMC7	Q7Z402	723 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	PNMA1	Q8ND90	353 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	NLRP7	Q8WX94	980 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	BORCS6	Q96GS4	357 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	CHAMP1	Q96JM3	812 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	MTR	Q99707	1265 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	CWH43	Q9H720	699 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	JMJD4	Q9H9V9	463 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	VAT1L	Q9HCJ6	419 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	DZANK1	Q9NVP4	752 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	DDX19B	Q9UMR2	479 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	TRPV2	Q9Y5S1	764 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	IGSF9B	Q9UPX0	1349 aa		9.8	□□□□□ -0.84
LINC00649-208	ENST00000596365	C2orf16	Q68DN1	1984 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	GPR179	Q6PRD1	2367 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	PRR5-ARHGAP8	B1AHC4	643 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	FIBP	O43427	364 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	WEE2	P0C1S8	567 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	PPM1A	P35813	382 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	ARHGAP8	P85298	464 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	SP4	Q02446	784 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	COL9A2	Q14055	689 aa	Predicted RBP	9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	CCDC178	Q5BJE1	867 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	MARCH8	Q5T0T0	291 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	VPS53	Q5VIR6	699 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	XRRA1	Q6P2D8	792 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	MFSD6	Q6ZSS7	791 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	OTOP3	Q7RTS5	596 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	DGKH	Q86XP1	1220 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	SUMF1	Q8NBK3	374 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	INPP4A	Q96PE3	977 aa	Predicted RBP	9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	FAM49A	Q9H0Q0	323 aa	Predicted RBP	9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	CHMP4B	Q9H444	224 aa	Known RBP	9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	C1orf112	Q9NSG2	853 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	ERAP1	Q9NZ08	941 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	NCDN	Q9UBB6	729 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	WNT16	Q9UBV4	365 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	CDV3	Q9UKY7	258 aa	Known RBP	9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	MIA3	Q5JRA6	1907 aa		9.79	□□□□□ -0.84
LINC00649-208	ENST00000596365	DENND3	A2RUS2	1198 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	C2orf71	A6NGG8	1288 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	RRN3P2	A6NIE6	340 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	GCOM1	H8Y6P7	765 aa	Predicted RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	KIN	O60870	393 aa	Known RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	CLASP2	O75122	1294 aa	Known RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	ADRB1	P08588	477 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	PARP1	P09874	1014 aa	Known RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	POLR2M	P0CAP2	368 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	TCF7	P36402	384 aa	Predicted RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	MRPS9	P82933	396 aa	Known RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	TRAF1	Q13077	416 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	SEMA3F	Q13275	785 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	BMS1	Q14692	1282 aa	Known RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	FAM102B	Q5T8I3	360 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	FCHSD1	Q86WN1	690 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	MRPL43	Q8N983	215 aa	Known RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	GIMAP8	Q8ND71	665 aa	Predicted RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	SENP7	Q9BQF6	1050 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	RTKN	Q9BST9	563 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	PRR14	Q9BWN1	585 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	CELF4	Q9BZC1	486 aa	Known RBP	9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	TMX1	Q9H3N1	280 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	KAT14	Q9H8E8	782 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	KCNK12	Q9HB15	430 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	IL21	Q9HBE4	155 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	IGSF9	Q9P2J2	1179 aa		9.78	□□□□□ -0.84
LINC00649-208	ENST00000596365	TTC41P	Q6P2S7	1318 aa		9.78	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms