RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CAPS2Q9BXY5 557 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 GOLGA6AQ9NYA3 693 aa18.67■□□□□ 0.58
SHKBP1-205ENST00000594973 RPTORQ8N122 1335 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 VWA5AO00534 786 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 CHUKO15111 745 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 FAM13AO94988 1023 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 FNTAP49354 379 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 ARHGAP27Q6ZUM4 889 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 EPM2AIP1Q7L775 607 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 TMCO5BA8MYB1 307 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 CETN3O15182 167 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 PLEKP08567 350 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 MYCLP12524 364 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 GGCXP38435 758 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 EPS15P42566 896 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 MRPS9P82933 396 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 EPHA7Q15375 998 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 C1orf186Q6ZWK4 172 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 APOBEC3FQ8IUX4 373 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 NACC1Q96RE7 527 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 RIT2Q99578 217 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 GPRC5DQ9NZD1 345 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 GUCA1BQ9UMX6 200 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 SAMM50Q9Y512 469 aa18.66■□□□□ 0.58
SHKBP1-205ENST00000594973 PPP1R12AO14974 1030 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 GNA14O95837 355 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 MTMR1Q13613 665 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 EDRF1Q3B7T1 1238 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 TKFCQ3LXA3 575 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 RRAGAQ7L523 313 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 AS3MTQ9HBK9 375 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 RIPK3Q9Y572 518 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 NMT1P30419 496 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 HERVK_113P62684 666 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 KCNMA1Q12791 1236 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 ITGB3BPQ13352 177 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 PCNX4Q63HM2 1172 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 B3GNT9Q6UX72 402 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 PPP4R3CPQ6ZMV5 832 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 RNF207Q6ZRF8 634 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 MIER3Q7Z3K6 550 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 TRIM59Q8IWR1 403 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 JPH2Q9BR39 696 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 IKZF4Q9H2S9 585 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 MCM8Q9UJA3 840 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 ZNF112Q9UJU3 913 aa18.65■□□□□ 0.58
SHKBP1-205ENST00000594973 LRRC53A6NM62 1247 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 AGPSO00116 658 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 ELF1P32519 619 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 RDXP35241 583 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 CYLC1P35663 651 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 HIRAP54198 1017 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 CYP27A1Q02318 531 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 ZC2HC1CQ53FD0 456 aaPredicted RBP18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 TRMT1LQ7Z2T5 733 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 CACNA2D4Q7Z3S7 1137 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 KCTD17Q8N5Z5 321 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 RMDN3Q96TC7 470 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 SH3GL2Q99962 352 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 CAPN7Q9Y6W3 813 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 GRIN2DO15399 1336 aa18.64■□□□□ 0.57
SHKBP1-205ENST00000594973 CLIC2O15247 247 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 CALRP27797 417 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 APBA1Q02410 837 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 KSR1Q8IVT5 923 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 CCDC42Q96M95 316 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 PARVGQ9HBI0 331 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 AGO4Q9HCK5 861 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 PLAGL2Q9UPG8 496 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 TRAF3IP3Q9Y228 551 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 GOLGA8KD6RF30 607 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 DHX15O43143 795 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 CALUO43852 315 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 KIAA0754O94854 1291 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 IPO7O95373 1038 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 BCRP11274 1271 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 GAP43P17677 238 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 PGM5Q15124 567 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 SKIDA1Q1XH10 827 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 PREPLQ4J6C6 727 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 DLK2Q6UY11 383 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 MAEAQ7L5Y9 396 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 YTHDF3Q7Z739 585 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 KIAA1328Q86T90 577 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 MIEF2Q96C03 454 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 IQCDQ96DY2 449 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 PAGR1Q9BTK6 254 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 NLRC4Q9NPP4 1024 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 OLFML3Q9NRN5 406 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 RNF146Q9NTX7 359 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 UBIAD1Q9Y5Z9 338 aa18.63■□□□□ 0.57
SHKBP1-205ENST00000594973 PDXKO00764 312 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 MARSP56192 900 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 KRT83P78385 493 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 CCDC122Q5T0U0 273 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 ARHGEF16Q5VV41 709 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 TRAPPC11Q7Z392 1133 aa18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 ZC3H3Q8IXZ2 948 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-205ENST00000594973 LSM14BQ9BX40 385 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms