RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 LMCD1Q9NZU5 365 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 AKT3Q9Y243 479 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 GINS2Q9Y248 185 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 EVPLQ92817 2033 aa19.91■□□□□ 0.78
SHKBP1-204ENST00000594862 LOXHD1Q8IVV2 1947 aa19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 DTNBO60941 627 aa19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 FOSBP53539 338 aa19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 GNL2Q13823 731 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 NPAS4Q8IUM7 802 aa19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 BANK1Q8NDB2 785 aa19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 FBXO18Q8NFZ0 1043 aa19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 CERS4Q9HA82 394 aa19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 ERVK-5Q9HDB9 667 aa19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 RALGAPA2Q2PPJ7 1873 aa19.9■□□□□ 0.78
SHKBP1-204ENST00000594862 FAM205CA6NFA0 338 aa19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 ARHGEF15O94989 841 aa19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 VTNP04004 478 aa19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 CLCN3P51790 818 aa19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 NFX1Q12986 1120 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 KIZQ2M2Z5 673 aa19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 MTERF2Q49AM1 385 aa19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 ADGRA3Q8IWK6 1321 aa19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 SUGCTQ9HAC7 445 aa19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 PCDHA12Q9UN75 941 aa19.89■□□□□ 0.77
SHKBP1-204ENST00000594862 TTC3P53804 2025 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 DDX11L8A8MPP1 907 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 EML1O00423 815 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 GAS2O43903 313 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 GPR32O75388 356 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 TRAPPC10P48553 1259 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 NLRP11P59045 1033 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 NCAPH2Q6IBW4 605 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 OTUD6AQ7L8S5 288 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 C4orf19Q8IY42 314 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 LRRC71Q8N4P6 559 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 FIBCD1Q8N539 461 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 FBXO22Q8NEZ5 403 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 SLC7A3Q8WY07 619 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 SCLT1Q96NL6 688 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 OSMRQ99650 979 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 ZSWIM4Q9H7M6 989 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 LRFN2Q9ULH4 789 aa19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 NOL7Q9UMY1 257 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 NOC2LQ9Y3T9 749 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-204ENST00000594862 IGKV6-21A0A0C4DH24 114 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 DENND3A2RUS2 1198 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 MAFO75444 373 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 STBD1O95210 358 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 EIF4BP23588 611 aaKnown RBP19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 RFC5P40937 340 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 SPIRE1Q08AE8 756 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 GRB10Q13322 594 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 LINC01599Q8WXQ3 324 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 TBC1D32Q96NH3 1257 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 LXNQ9BS40 222 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 MTUS1Q9ULD2 1270 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 ST3GAL5Q9UNP4 418 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 MTCH2Q9Y6C9 303 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 NCOR1O75376 2440 aa19.87■□□□□ 0.77
SHKBP1-204ENST00000594862 EPOPA6NHQ4 379 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 DGKIO75912 1065 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 SARSP49591 514 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 GPC3P51654 580 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 GUCY1B3Q02153 619 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 PTPROQ16827 1216 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 TMEM266Q2M3C6 531 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 SLC24A5Q71RS6 500 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 ANO5Q75V66 913 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 ZNF410Q86VK4 478 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 NOSTRINQ8IVI9 506 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 CMTR2Q8IYT2 770 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 TMEM40Q8WWA1 233 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 INO80BQ9C086 356 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 ADAMTS10Q9H324 1103 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 TMX1Q9H3N1 280 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 TTC12Q9H892 705 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 RC3H2Q9HBD1 1191 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 CYP26B1Q9NR63 512 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 RGS18Q9NS28 235 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 THEGQ9P2T0 379 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 NLRC5Q86WI3 1866 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 CHD7Q9P2D1 2997 aa19.86■□□□□ 0.77
SHKBP1-204ENST00000594862 YWHABP31946 246 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 BTG3Q14201 252 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 FAM228AQ86W67 206 aa19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 NLRP7Q8WX94 980 aa19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 PPM1EQ8WY54 764 aa19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 ZNF689Q96CS4 500 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 CEP170P1Q96L14 293 aa19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 MTMR9Q96QG7 549 aa19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 CEP89Q96ST8 783 aa19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 PPP1R16BQ96T49 567 aa19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 C17orf80Q9BSJ5 609 aa19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 GCOM2Q9BZD3 368 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 CDHR5Q9HBB8 845 aa19.85■□□□□ 0.77
SHKBP1-204ENST00000594862 RFXAPO00287 272 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 LPXNO60711 386 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 LYPLA2O95372 231 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 RB1P06400 928 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 DARSP14868 501 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms