RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 ATP2C1P98194 919 aaPredicted RBP24.51■■□□□ 1.51
HOMER3-206ENST00000594439 DRP2Q13474 957 aa24.51■■□□□ 1.51
HOMER3-206ENST00000594439 IL17AQ16552 155 aa24.51■■□□□ 1.51
HOMER3-206ENST00000594439 OTUD6AQ7L8S5 288 aa24.51■■□□□ 1.51
HOMER3-206ENST00000594439 CATSPER3Q86XQ3 398 aa24.51■■□□□ 1.51
HOMER3-206ENST00000594439 USP38Q8NB14 1042 aa24.51■■□□□ 1.51
HOMER3-206ENST00000594439 CEP170P1Q96L14 293 aa24.51■■□□□ 1.51
HOMER3-206ENST00000594439 POLR3CQ9BUI4 534 aaPredicted RBP24.51■■□□□ 1.51
HOMER3-206ENST00000594439 TUFT1Q9NNX1 390 aa24.51■■□□□ 1.51
HOMER3-206ENST00000594439 MTMR6Q9Y217 621 aa24.51■■□□□ 1.51
HOMER3-206ENST00000594439 AKT3Q9Y243 479 aa24.51■■□□□ 1.51
HOMER3-206ENST00000594439 CD52P31358 61 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 RABGGTBP53611 331 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 RESTQ13127 1097 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 KIZQ2M2Z5 673 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 XKR9Q5GH70 373 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.5■■□□□ 1.51
HOMER3-206ENST00000594439 HERC6Q8IVU3 1022 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 IGSF22Q8N9C0 903 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 TMEM40Q8WWA1 233 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 PPP1R16BQ96T49 567 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 DHX33Q9H6R0 707 aaKnown RBP24.5■■□□□ 1.51
HOMER3-206ENST00000594439 ANKEF1Q9NU02 776 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 GINS2Q9Y248 185 aa24.5■■□□□ 1.51
HOMER3-206ENST00000594439 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.49■■□□□ 1.51
HOMER3-206ENST00000594439 CRYBB1P53674 252 aaPredicted RBP24.49■■□□□ 1.51
HOMER3-206ENST00000594439 PDIA5Q14554 519 aa24.49■■□□□ 1.51
HOMER3-206ENST00000594439 RAB30Q15771 203 aa24.49■■□□□ 1.51
HOMER3-206ENST00000594439 ERMNQ8TAM6 284 aa24.49■■□□□ 1.51
HOMER3-206ENST00000594439 JPH2Q9BR39 696 aaPredicted RBP24.49■■□□□ 1.51
HOMER3-206ENST00000594439 ADAMTS10Q9H324 1103 aa24.49■■□□□ 1.51
HOMER3-206ENST00000594439 LRWD1Q9UFC0 647 aa24.49■■□□□ 1.51
HOMER3-206ENST00000594439 YBX2Q9Y2T7 364 aaKnown RBP24.49■■□□□ 1.51
HOMER3-206ENST00000594439 NOC2LQ9Y3T9 749 aaKnown RBP24.49■■□□□ 1.51
HOMER3-206ENST00000594439 A0A087WWV3 80 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 STX6O43752 255 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 XRCC6P12956 609 aaKnown RBP eCLIP24.48■■□□□ 1.51
HOMER3-206ENST00000594439 RPA1P27694 616 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 RFC5P40937 340 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 NLRP11P59045 1033 aaKnown RBP24.48■■□□□ 1.51
HOMER3-206ENST00000594439 SZT2Q5T011 3432 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 DTHD1Q6ZMT9 781 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 Q7L0L9 218 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 TMCO2Q7Z6W1 182 aaPredicted RBP24.48■■□□□ 1.51
HOMER3-206ENST00000594439 ZNF710Q8N1W2 664 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 OSMRQ99650 979 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 PADI3Q9ULW8 664 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 PCDHA11Q9Y5I1 949 aa24.48■■□□□ 1.51
HOMER3-206ENST00000594439 GPC3P51654 580 aa24.47■■□□□ 1.51
HOMER3-206ENST00000594439 POLGP54098 1239 aaPredicted RBP24.47■■□□□ 1.51
HOMER3-206ENST00000594439 DEFB123Q8N688 67 aa24.47■■□□□ 1.51
HOMER3-206ENST00000594439 PIGOQ8TEQ8 1089 aa24.47■■□□□ 1.51
HOMER3-206ENST00000594439 SLC7A3Q8WY07 619 aa24.47■■□□□ 1.51
HOMER3-206ENST00000594439 TIFAQ96CG3 184 aa24.47■■□□□ 1.51
HOMER3-206ENST00000594439 RAB34Q9BZG1 259 aa24.47■■□□□ 1.51
HOMER3-206ENST00000594439 TTYH1Q9H313 450 aaPredicted RBP24.47■■□□□ 1.51
HOMER3-206ENST00000594439 ERVK-5Q9HDB9 667 aa24.47■■□□□ 1.51
HOMER3-206ENST00000594439 SUCLA2Q9P2R7 463 aaPredicted RBP24.47■■□□□ 1.51
HOMER3-206ENST00000594439 MSRAQ9UJ68 235 aa24.47■■□□□ 1.51
HOMER3-206ENST00000594439 TMEM265A0A087WTH1 108 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 RPS6KA5O75582 802 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 AMHP03971 560 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 MYOGP15173 224 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 RARRES1P49788 294 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 DNM2P50570 870 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 PAK2Q13177 524 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 ZNF697Q5TEC3 545 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 HAUS3Q68CZ6 603 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 POTEGQ6S5H5 508 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 EXOC8Q8IYI6 725 aa24.46■■□□□ 1.51
HOMER3-206ENST00000594439 ZNF668Q96K58 619 aaPredicted RBP24.46■■□□□ 1.51
HOMER3-206ENST00000594439 HSP90AA1P07900 732 aaKnown RBP24.45■■□□□ 1.5
HOMER3-206ENST00000594439 MUTP22033 750 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 CCT6AP40227 531 aaKnown RBP24.45■■□□□ 1.5
HOMER3-206ENST00000594439 EMC2Q15006 297 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 ECM1Q16610 540 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 ARL6IP4Q66PJ3 421 aaKnown RBP24.45■■□□□ 1.5
HOMER3-206ENST00000594439 FAM228AQ86W67 206 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 LINC01599Q8WXQ3 324 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 NACC1Q96RE7 527 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 NKX2-4Q9H2Z4 354 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 TMX1Q9H3N1 280 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 XPNPEP1Q9NQW7 623 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 BMP2KQ9NSY1 1161 aaPredicted RBP24.45■■□□□ 1.5
HOMER3-206ENST00000594439 STK24Q9Y6E0 443 aa24.45■■□□□ 1.5
HOMER3-206ENST00000594439 LAMA2P24043 3122 aaKnown RBP24.45■■□□□ 1.5
HOMER3-206ENST00000594439 PP2D1A8MPX8 630 aa24.44■■□□□ 1.5
HOMER3-206ENST00000594439 ENPP3O14638 875 aa24.44■■□□□ 1.5
HOMER3-206ENST00000594439 GAS2O43903 313 aaKnown RBP24.44■■□□□ 1.5
HOMER3-206ENST00000594439 GJB5O95377 273 aa24.44■■□□□ 1.5
HOMER3-206ENST00000594439 BMP15O95972 392 aa24.44■■□□□ 1.5
HOMER3-206ENST00000594439 SF3A1Q15459 793 aaKnown RBP24.44■■□□□ 1.5
HOMER3-206ENST00000594439 FAM173BQ6P4H8 233 aa24.44■■□□□ 1.5
HOMER3-206ENST00000594439 RTN4RL1Q86UN2 441 aaPredicted RBP24.44■■□□□ 1.5
HOMER3-206ENST00000594439 MYOCDQ8IZQ8 938 aa24.44■■□□□ 1.5
HOMER3-206ENST00000594439 TMEM143Q96AN5 459 aa24.44■■□□□ 1.5
HOMER3-206ENST00000594439 SEMA6BQ9H3T3 888 aa24.44■■□□□ 1.5
HOMER3-206ENST00000594439 MTMR10Q9NXD2 777 aa24.44■■□□□ 1.5
HOMER3-206ENST00000594439 DBR1Q9UK59 544 aaKnown RBP24.44■■□□□ 1.5
HOMER3-206ENST00000594439 DARSP14868 501 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms