RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ARHGEF35A5YM69 484 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 STBD1O95210 358 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
VMP1-217ENST00000593168 PRCPP42785 496 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 MYL5Q02045 173 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 STK4Q13043 487 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 STIM1Q13586 685 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 ACVR2BQ13705 512 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 LAMC2Q13753 1193 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 OLFML2BQ68BL8 750 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 IQSEC1Q6DN90 963 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 PADI6Q6TGC4 694 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 CCDC60Q8IWA6 550 aaPredicted RBP14.93□□□□□ -0.02
VMP1-217ENST00000593168 DHX37Q8IY37 1157 aaKnown RBP14.93□□□□□ -0.02
VMP1-217ENST00000593168 AOPEPQ8N6M6 819 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 AFAP1L1Q8TED9 768 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 ANP32BQ92688 251 aaKnown RBP14.93□□□□□ -0.02
VMP1-217ENST00000593168 RUSC1Q9BVN2 902 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 SEMA6BQ9H3T3 888 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 PRDM5Q9NQX1 630 aaPredicted RBP14.93□□□□□ -0.02
VMP1-217ENST00000593168 ZNF302Q9NR11 478 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 GDAQ9Y2T3 454 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 TELO2Q9Y4R8 837 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 WDR81Q562E7 1941 aa14.93□□□□□ -0.02
VMP1-217ENST00000593168 IGSF9BQ9UPX0 1349 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 PRUNE2Q8WUY3 3088 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 NPHP3-ACAD11A0A0J9YXS1 232 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 BACH1O14867 736 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 ZNF862O60290 1169 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 GH1P01241 217 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 GAP43P17677 238 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 GUCY2CP25092 1073 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 TPM4P67936 248 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 SP4Q02446 784 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 COASYQ13057 564 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 TRIM60Q495X7 471 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 XKR3Q5GH77 459 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 FAM160B1Q5W0V3 765 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 SMYD4Q8IYR2 804 aaPredicted RBP14.92□□□□□ -0.02
VMP1-217ENST00000593168 ARRDC4Q8NCT1 418 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 MAFAQ8NHW3 353 aaPredicted RBP14.92□□□□□ -0.02
VMP1-217ENST00000593168 MYLIPQ8WY64 445 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 BADQ92934 168 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 EMID1Q96A84 441 aaPredicted RBP14.92□□□□□ -0.02
VMP1-217ENST00000593168 DHTKD1Q96HY7 919 aaPredicted RBP14.92□□□□□ -0.02
VMP1-217ENST00000593168 GPR20Q99678 358 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 REEP2Q9BRK0 252 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 TIPINQ9BVW5 301 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 TTYH1Q9H313 450 aaPredicted RBP14.92□□□□□ -0.02
VMP1-217ENST00000593168 ODF2LQ9ULJ1 636 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 COL4A3BPQ9Y5P4 624 aa14.92□□□□□ -0.02
VMP1-217ENST00000593168 KBTBD13C9JR72 458 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 NOP56O00567 594 aaKnown RBP14.91□□□□□ -0.02
VMP1-217ENST00000593168 NKRFO15226 690 aaKnown RBP eCLIP14.91□□□□□ -0.02
VMP1-217ENST00000593168 SORBS3O60504 671 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 LGR5O75473 907 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 TCF7P36402 384 aaPredicted RBP14.91□□□□□ -0.02
VMP1-217ENST00000593168 STAT5BP51692 787 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 PAK1Q13153 545 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 SNX17Q15036 470 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 XKR9Q5GH70 373 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 HERC4Q5GLZ8 1057 aaPredicted RBP14.91□□□□□ -0.02
VMP1-217ENST00000593168 FAM26FQ5R3K3 315 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 PRAMEF19Q5SWL8 479 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 ANO5Q75V66 913 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 PLPPR4Q7Z2D5 763 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 GUF1Q8N442 669 aaKnown RBP14.91□□□□□ -0.02
VMP1-217ENST00000593168 KIAA0895Q8NCT3 520 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 CCDC43Q96MW1 224 aaKnown RBP14.91□□□□□ -0.02
VMP1-217ENST00000593168 PCYT2Q99447 389 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 PDLIM7Q9NR12 457 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 RWDD2AQ9UIY3 292 aa14.91□□□□□ -0.02
VMP1-217ENST00000593168 MYH9P35579 1960 aaKnown RBP14.91□□□□□ -0.02
VMP1-217ENST00000593168 TRIM43BA6NCK2 446 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 PSMA7O14818 248 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 SEPT4O43236 478 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 TBCAO75347 108 aaKnown RBP14.9□□□□□ -0.02
VMP1-217ENST00000593168 ATP4AP20648 1035 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 ADCYAP1R1P41586 468 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 ZNF131P52739 623 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 PRKCEQ02156 737 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 ARHGAP1Q07960 439 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 HSDL1Q3SXM5 330 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 DUSP28Q4G0W2 176 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 SPATA1Q5VX52 437 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 KLHL10Q6JEL2 608 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 COPS5Q92905 334 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
VMP1-217ENST00000593168 SPATA33Q96N06 139 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 MED15Q96RN5 788 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 NIFKQ9BYG3 293 aaKnown RBP14.9□□□□□ -0.02
VMP1-217ENST00000593168 AZI2Q9H6S1 392 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 SLC39A2Q9NP94 309 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 NRBP2Q9NSY0 501 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 SEL1LQ9UBV2 794 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 NRBP1Q9UHY1 535 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 PCDHA2Q9Y5H9 948 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 EMSYQ7Z589 1322 aa14.9□□□□□ -0.02
VMP1-217ENST00000593168 FAM13AO94988 1023 aa14.89□□□□□ -0.03
VMP1-217ENST00000593168 KIF20AO95235 890 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms