RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 GJA10Q969M2 543 aa12.75□□□□□ -0.37
PRKCSH-220ENST00000593104 PPP2R3CQ969Q6 453 aa12.75□□□□□ -0.37
PRKCSH-220ENST00000593104 PHF7Q9BWX1 381 aaPredicted RBP12.75□□□□□ -0.37
PRKCSH-220ENST00000593104 NAP1L2Q9ULW6 460 aaPredicted RBP12.75□□□□□ -0.37
PRKCSH-220ENST00000593104 PCDHB12Q9Y5F1 795 aa12.75□□□□□ -0.37
PRKCSH-220ENST00000593104 IGLV3-22A0A075B6J6 115 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 KLF18A0A0U1RQI7 1052 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 GOLGA8AA7E2F4 631 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 GOLGA8BA8MQT2 603 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 CSDE1O75534 798 aaKnown RBP12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 DSC3Q14574 896 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 CBX2Q14781 532 aaPredicted RBP12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 FAM160B1Q5W0V3 765 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 SLC24A5Q71RS6 500 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 NME8Q8N427 588 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 RNF169Q8NCN4 708 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 SUSD6Q92537 303 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 CASD1Q96PB1 797 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 TCF25Q9BQ70 676 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 S1PR5Q9H228 398 aa12.74□□□□□ -0.37
PRKCSH-220ENST00000593104 NT5C1B-RDH14C9J2C7 533 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 ZBTB43O43298 467 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 ADD1P35611 737 aaKnown RBP12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 EXOSC10Q01780 885 aaKnown RBP12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 KCNC3Q14003 757 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 LONRF3Q496Y0 759 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 ANKRD54Q6NXT1 300 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 MIS18BP1Q6P0N0 1132 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 SYNE3Q6ZMZ3 975 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 SUGP1Q8IWZ8 645 aaKnown RBP12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 NEK1Q96PY6 1258 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 ZNF577Q9BSK1 485 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 ATP6V0A4Q9HBG4 840 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 ENTPD7Q9NQZ7 604 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 TSHZ2Q9NRE2 1034 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 C1orf112Q9NSG2 853 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 RBM28Q9NW13 759 aaKnown RBP12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 BARHL2Q9NY43 387 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 GABBR1Q9UBS5 961 aa12.73□□□□□ -0.37
PRKCSH-220ENST00000593104 TMEM150BA6NC51 233 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 IPO5O00410 1097 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 GPR182O15218 404 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 CA8P35219 290 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 CRYBB1P53674 252 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 NLRP11P59045 1033 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 DRP2Q13474 957 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 UGCGQ16739 394 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 ZNF484Q5JVG2 852 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 CLLU1OSQ5K130 101 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 BMP8AQ7Z5Y6 402 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 FBXL6Q8N531 539 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 MRPS27Q92552 414 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 SH2D3AQ9BRG2 576 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 KCNH6Q9H252 994 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 AAASQ9NRG9 546 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 TMEM161AQ9NX61 479 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 AKT3Q9Y243 479 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 MYO10Q9HD67 2058 aa12.72□□□□□ -0.37
PRKCSH-220ENST00000593104 COL1A2P08123 1366 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 EDIL3O43854 480 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 ZNF862O60290 1169 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 FOSP01100 380 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 RPLP2P05387 115 aaKnown RBP12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 LAG3P18627 525 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 SLC26A2P50443 739 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.371e-13■■■□□ 15.3
PRKCSH-220ENST00000593104 FAM189BP81408 668 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 UBE3AQ05086 875 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 SIGLEC14Q08ET2 396 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 AP3B2Q13367 1082 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 PRR16Q569H4 304 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 EFCAB12Q6NXP0 572 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 KCNT2Q6UVM3 1135 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 ZBTB33Q86T24 672 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 TMEM173Q86WV6 379 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 C12orf76Q8N812 135 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 HELQQ8TDG4 1101 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 AUTS2Q8WXX7 1259 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 ADAMTS10Q9H324 1103 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 SAMM50Q9Y512 469 aa12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 MAFBQ9Y5Q3 323 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-220ENST00000593104 TRIOO75962 3097 aa12.71□□□□□ -0.38
PRKCSH-220ENST00000593104 C2CD4DB7Z1M9 353 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 H0Y858 1186 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 CHMP2AO43633 222 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 ASGR2P07307 311 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 ATF7P17544 494 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 AVPR2P30518 371 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 PTPN5P54829 565 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 PKN1Q16512 942 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 PTPN21Q16825 1174 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 PFKFB3Q16875 520 aaPredicted RBP12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 DHX32Q7L7V1 743 aaKnown RBP12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 ECHDC2Q86YB7 292 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 LINC01465Q8N7H1 131 aa12.7□□□□□ -0.38
PRKCSH-220ENST00000593104 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms