RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 LMCD1Q9NZU5 365 aa15.62■□□□□ 0.09
APOC1-208ENST00000592535 SEPT9Q9UHD8 586 aaPredicted RBP15.62■□□□□ 0.09
APOC1-208ENST00000592535 LIMCH1Q9UPQ0 1083 aa15.62■□□□□ 0.09
APOC1-208ENST00000592535 AKT3Q9Y243 479 aa15.62■□□□□ 0.09
APOC1-208ENST00000592535 ADGRA3Q8IWK6 1321 aa15.62■□□□□ 0.09
APOC1-208ENST00000592535 BTBD18B2RXH4 712 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 MGEA5O60502 916 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 DGKIO75912 1065 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 PPP2R5CQ13362 524 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 MTERF2Q49AM1 385 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 XKR3Q5GH77 459 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 TJAP1Q5JTD0 557 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 FAM228AQ86W67 206 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 DIS3L2Q8IYB7 885 aaKnown RBP15.61■□□□□ 0.09
APOC1-208ENST00000592535 CRIPAKQ8N1N5 446 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 FIBCD1Q8N539 461 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 HAS1Q92839 578 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 ZNF689Q96CS4 500 aaPredicted RBP15.61■□□□□ 0.09
APOC1-208ENST00000592535 ZNF668Q96K58 619 aaPredicted RBP15.61■□□□□ 0.09
APOC1-208ENST00000592535 MAP7D2Q96T17 732 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 SH2D3AQ9BRG2 576 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 NIFKQ9BYG3 293 aaKnown RBP15.61■□□□□ 0.09
APOC1-208ENST00000592535 ST3GAL5Q9UNP4 418 aa15.61■□□□□ 0.09
APOC1-208ENST00000592535 FNDC1Q4ZHG4 1894 aaPredicted RBP15.61■□□□□ 0.09
APOC1-208ENST00000592535 TCF20Q9UGU0 1960 aaKnown RBP15.6■□□□□ 0.09
APOC1-208ENST00000592535 ARID2Q68CP9 1835 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 TBX3O15119 743 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 GPR182O15218 404 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 LINC00271P0C7V0 271 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 TMOD1P28289 359 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 NLRP11P59045 1033 aaKnown RBP15.6■□□□□ 0.09
APOC1-208ENST00000592535 PSMC5P62195 406 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 TBC1D8BQ0IIM8 1120 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 GPM6BQ13491 265 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 TRIM29Q14134 588 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 ODR4Q5SWX8 454 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 NPAS4Q8IUM7 802 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 ASB2Q96Q27 587 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 CEP89Q96ST8 783 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 ADAMTS10Q9H324 1103 aa15.6■□□□□ 0.09
APOC1-208ENST00000592535 DDX11L8A8MPP1 907 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 H3BNC9 293 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 WNT7AO00755 349 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 MARCH6O60337 910 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 STAG3L1P0CL83 205 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 IBSPP21815 317 aaPredicted RBP15.59■□□□□ 0.09
APOC1-208ENST00000592535 CTNNB1P35222 781 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 GATMP50440 423 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 GPC3P51654 580 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 MRPS5P82675 430 aaKnown RBP15.59■□□□□ 0.09
APOC1-208ENST00000592535 GUCY1B3Q02153 619 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 TFF2Q03403 129 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 DRP2Q13474 957 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 BTG3Q14201 252 aaPredicted RBP15.59■□□□□ 0.09
APOC1-208ENST00000592535 ADAM2Q99965 735 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 REV3LO60673 3130 aa15.59■□□□□ 0.09
APOC1-208ENST00000592535 DENND3A2RUS2 1198 aa15.58■□□□□ 0.08
APOC1-208ENST00000592535 QARSP47897 775 aaKnown RBP15.58■□□□□ 0.08
APOC1-208ENST00000592535 SARSP49591 514 aaKnown RBP15.58■□□□□ 0.08
APOC1-208ENST00000592535 SPIRE1Q08AE8 756 aa15.58■□□□□ 0.08
APOC1-208ENST00000592535 PAN2Q504Q3 1202 aaKnown RBP15.58■□□□□ 0.08
APOC1-208ENST00000592535 PLA2G4FQ68DD2 849 aa15.58■□□□□ 0.08
APOC1-208ENST00000592535 NCAPH2Q6IBW4 605 aa15.58■□□□□ 0.08
APOC1-208ENST00000592535 ANO5Q75V66 913 aa15.58■□□□□ 0.08
APOC1-208ENST00000592535 SYMPKQ92797 1274 aaKnown RBP15.58■□□□□ 0.08
APOC1-208ENST00000592535 RGS18Q9NS28 235 aa15.58■□□□□ 0.08
APOC1-208ENST00000592535 WRAP73Q9P2S5 460 aaPredicted RBP15.58■□□□□ 0.08
APOC1-208ENST00000592535 LRFN2Q9ULH4 789 aa15.58■□□□□ 0.08
APOC1-208ENST00000592535 MRPL42Q9Y6G3 142 aaKnown RBP15.58■□□□□ 0.08
APOC1-208ENST00000592535 A0A0C4DFX4 3053 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 IGKV6-21A0A0C4DH24 114 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 C9IYK1 514 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 C5orf67F2Z3F1 127 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 BAG4O95429 457 aaKnown RBP15.57■□□□□ 0.08
APOC1-208ENST00000592535 P4HBP07237 508 aaKnown RBP15.57■□□□□ 0.08
APOC1-208ENST00000592535 BMPR1AP36894 532 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 RBM25P49756 843 aaKnown RBP15.57■□□□□ 0.08
APOC1-208ENST00000592535 DSC3Q14574 896 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 EPHA7Q15375 998 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 FAM43BQ6ZT52 329 aaPredicted RBP15.57■□□□□ 0.08
APOC1-208ENST00000592535 SLC24A5Q71RS6 500 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 SLFN12Q8IYM2 578 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 CMTR2Q8IYT2 770 aaKnown RBP15.57■□□□□ 0.08
APOC1-208ENST00000592535 CLP1Q92989 425 aaKnown RBP15.57■□□□□ 0.08
APOC1-208ENST00000592535 MRPL38Q96DV4 380 aaKnown RBP15.57■□□□□ 0.08
APOC1-208ENST00000592535 ZSCAN31Q96LW9 406 aaPredicted RBP15.57■□□□□ 0.08
APOC1-208ENST00000592535 SCLT1Q96NL6 688 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 LLPHQ9BRT6 129 aaKnown RBP15.57■□□□□ 0.08
APOC1-208ENST00000592535 C1orf112Q9NSG2 853 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 RWDD3Q9Y3V2 267 aa15.57■□□□□ 0.08
APOC1-208ENST00000592535 BRWD1Q9NSI6 2320 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 CUL9Q8IWT3 2517 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 DKC1O60832 514 aaKnown RBP eCLIP15.56■□□□□ 0.08
APOC1-208ENST00000592535 MAFO75444 373 aaPredicted RBP15.56■□□□□ 0.08
APOC1-208ENST00000592535 RB1P06400 928 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 DARSP14868 501 aaKnown RBP15.56■□□□□ 0.08
APOC1-208ENST00000592535 EIF4BP23588 611 aaKnown RBP15.56■□□□□ 0.08
APOC1-208ENST00000592535 KCNQ1P51787 676 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 NPEPPSP55786 919 aa15.56■□□□□ 0.08
APOC1-208ENST00000592535 CALCRLQ16602 461 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms