RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 NLRP5P59047 1200 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 COL19A1Q14993 1142 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 CSPP1Q1MSJ5 1256 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 METTL13Q8N6R0 699 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 CRYGNQ8WXF5 182 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 PHKBQ93100 1093 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 POP1Q99575 1024 aaKnown RBP11.47□□□□□ -0.57
VMP1-214ENST00000592106 TEKT3Q9BXF9 490 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 AGXT2Q9BYV1 514 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 ERVK-5Q9HDB9 667 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 SH3GLB2Q9NR46 395 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 PCDHB12Q9Y5F1 795 aa11.47□□□□□ -0.57
VMP1-214ENST00000592106 MAFBQ9Y5Q3 323 aaPredicted RBP11.47□□□□□ -0.57
VMP1-214ENST00000592106 PI4K2BG5E9Z4 385 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 DHX15O43143 795 aaKnown RBP11.46□□□□□ -0.57
VMP1-214ENST00000592106 HOXA2O43364 376 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 GAS7O60861 476 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 CSPG5O95196 566 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 C22orf31O95567 290 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 LINC00271P0C7V0 271 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 NDUFV1P49821 464 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 JAK3P52333 1124 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 CRYBB1P53674 252 aaPredicted RBP11.46□□□□□ -0.57
VMP1-214ENST00000592106 UBE3AQ05086 875 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 SSRP1Q08945 709 aaKnown RBP11.46□□□□□ -0.57
VMP1-214ENST00000592106 HYAL1Q12794 435 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 PKN1Q16512 942 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 TMEM266Q2M3C6 531 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 SLC24A5Q71RS6 500 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 FAM177A1Q8N128 213 aaPredicted RBP11.46□□□□□ -0.57
VMP1-214ENST00000592106 FAM122AQ96E09 287 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 SCLT1Q96NL6 688 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 ADAM2Q99965 735 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 LRFN3Q9BTN0 628 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 UPF3BQ9BZI7 483 aaKnown RBP11.46□□□□□ -0.57
VMP1-214ENST00000592106 EPHX3Q9H6B9 360 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 ATP6V0A4Q9HBG4 840 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 RGS18Q9NS28 235 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 NRBP2Q9NSY0 501 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 VPS54Q9P1Q0 977 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 GABBR1Q9UBS5 961 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 PLAGL2Q9UPG8 496 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 AKT3Q9Y243 479 aa11.46□□□□□ -0.57
VMP1-214ENST00000592106 NOC2LQ9Y3T9 749 aaKnown RBP11.46□□□□□ -0.57
VMP1-214ENST00000592106 TTC28Q96AY4 2481 aa11.46□□□□□ -0.58
VMP1-214ENST00000592106 RBAK-RBAKDNI3L0D1 243 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 GPR37L1O60883 481 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 OATP04181 439 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 SRGAP2BP0DMP2 458 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 SFNP31947 248 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 PLA2G5P39877 138 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 USP11P51784 963 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 CCT2P78371 535 aaKnown RBP11.45□□□□□ -0.58
VMP1-214ENST00000592106 SMAD4Q13485 552 aaKnown RBP11.45□□□□□ -0.58
VMP1-214ENST00000592106 KIZQ2M2Z5 673 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 RTN4RL1Q86UN2 441 aaPredicted RBP11.45□□□□□ -0.58
VMP1-214ENST00000592106 ADHFE1Q8IWW8 467 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 KIAA0319LQ8IZA0 1049 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 KLHL23Q8NBE8 558 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 RDM1Q8NG50 284 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 RASGRP4Q8TDF6 673 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 POF1BQ8WVV4 589 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 RIT2Q99578 217 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 OSMRQ99650 979 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 TMX1Q9H3N1 280 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 IGFLR1Q9H665 355 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 ELAC1Q9H777 363 aaKnown RBP11.45□□□□□ -0.58
VMP1-214ENST00000592106 ALG13Q9NP73 1137 aaKnown RBP11.45□□□□□ -0.58
VMP1-214ENST00000592106 DISC1Q9NRI5 854 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 CD207Q9UJ71 328 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 ST3GAL5Q9UNP4 418 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 ARIH1Q9Y4X5 557 aaPredicted RBP11.45□□□□□ -0.58
VMP1-214ENST00000592106 CYP46A1Q9Y6A2 500 aa11.45□□□□□ -0.58
VMP1-214ENST00000592106 SPTBN5Q9NRC6 3674 aaKnown RBP11.45□□□□□ -0.58
VMP1-214ENST00000592106 MYH9P35579 1960 aaKnown RBP11.45□□□□□ -0.58
VMP1-214ENST00000592106 KIAA1671Q9BY89 1806 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 VCANP13611 3396 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 TBKBP1A7MCY6 615 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 ZBTB42B2RXF5 422 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 DCXO43602 365 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 CDKL5O76039 1030 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 DEXIO95424 95 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 VTNP04004 478 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 ITGB1P05556 798 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 ZSCAN20P17040 1043 aaPredicted RBP11.44□□□□□ -0.58
VMP1-214ENST00000592106 LAG3P18627 525 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 ATP4AP20648 1035 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 PDIA3P30101 505 aaKnown RBP11.44□□□□□ -0.58
VMP1-214ENST00000592106 CLCN3P51790 818 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 PRKCEQ02156 737 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 CTC1Q2NKJ3 1217 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 LRCH2Q5VUJ6 765 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 PDE12Q6L8Q7 609 aaKnown RBP11.44□□□□□ -0.58
VMP1-214ENST00000592106 RUFY3Q7L099 469 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 TRMT1LQ7Z2T5 733 aaKnown RBP11.44□□□□□ -0.58
VMP1-214ENST00000592106 FAM228AQ86W67 206 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 THNSL1Q8IYQ7 743 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 ABI1Q8IZP0 508 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 CRIPAKQ8N1N5 446 aa11.44□□□□□ -0.58
VMP1-214ENST00000592106 SPPL3Q8TCT6 385 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms