RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 MIER3Q7Z3K6 550 aa22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 RTN4RL1Q86UN2 441 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 EXOC8Q8IYI6 725 aa22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 CRIPAKQ8N1N5 446 aa22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 LINC01599Q8WXQ3 324 aa22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 SCLT1Q96NL6 688 aa22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 UPF3BQ9BZI7 483 aaKnown RBP22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 SLKQ9H2G2 1235 aaPredicted RBP22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 ATP6V0A4Q9HBG4 840 aa22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 PRKAG3Q9UGI9 489 aa22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 NOC2LQ9Y3T9 749 aaKnown RBP22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 MYH9P35579 1960 aaKnown RBP22.24■■□□□ 1.15
TNFRSF11A-204ENST00000592013 CCDC194A0A1B0GVG4 234 aa22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 GCFC2P16383 781 aaKnown RBP22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 ATP4AP20648 1035 aa22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 PRKCEQ02156 737 aa22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 TRMT1LQ7Z2T5 733 aaKnown RBP22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 TMX1Q9H3N1 280 aa22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 TMEM161AQ9NX61 479 aa22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 CLDND1Q9NY35 253 aa22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 PLAGL2Q9UPG8 496 aa22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 MRPL42Q9Y6G3 142 aaKnown RBP22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 TCF20Q9UGU0 1960 aaKnown RBP22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 BDP1A6H8Y1 2624 aa22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 MUC3AQ02505 3323 aa22.23■■□□□ 1.15
TNFRSF11A-204ENST00000592013 CARNS1A5YM72 827 aa22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 GRXCR2A6NFK2 248 aa22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 GRM6O15303 877 aa22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 CHMP2AO43633 222 aa22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 EIF4BP23588 611 aaKnown RBP22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 SSTR3P32745 418 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 XKR3Q5GH77 459 aa22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 PDE12Q6L8Q7 609 aaKnown RBP22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 ABI1Q8IZP0 508 aa22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 POP1Q99575 1024 aaKnown RBP22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 OSMRQ99650 979 aa22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 STK36Q9NRP7 1315 aa22.22■■□□□ 1.15
TNFRSF11A-204ENST00000592013 PPFIA3O75145 1194 aa22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 VTNP04004 478 aa22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 NLRP11P59045 1033 aaKnown RBP22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 STK3Q13188 491 aa22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 PAN2Q504Q3 1202 aaKnown RBP22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 FAM178BQ8IXR5 827 aa22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 GJD3Q8N144 294 aa22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 FAM20AQ96MK3 541 aa22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 UIMC1Q96RL1 719 aa22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 INO80BQ9C086 356 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 BRMS1Q9HCU9 246 aa22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 DACT1Q9NYF0 836 aa22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 DDX25Q9UHL0 483 aaKnown RBP22.21■■□□□ 1.15
TNFRSF11A-204ENST00000592013 C9IYK1 514 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 MARCH6O60337 910 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 GPR32O75388 356 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 PSMD10O75832 226 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 LINC00271P0C7V0 271 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 ALADP13716 330 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 LAG3P18627 525 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 COL9A1P20849 921 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 NIFKQ9BYG3 293 aaKnown RBP22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 UNC45AQ9H3U1 944 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 PPP4R2Q9NY27 417 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 PUF60Q9UHX1 559 aaKnown RBP22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 PPME1Q9Y570 386 aa22.2■■□□□ 1.14
TNFRSF11A-204ENST00000592013 TBKBP1A7MCY6 615 aa22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 H3BQ06 376 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 SRGAP2BP0DMP2 458 aa22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 CLCN3P51790 818 aa22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 FAM189BP81408 668 aa22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 FAM228AQ86W67 206 aa22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 KLHL23Q8NBE8 558 aa22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 TMEM40Q8WWA1 233 aa22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 GCOM2Q9BZD3 368 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 ALG13Q9NP73 1137 aaKnown RBP22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 SEPT9Q9UHD8 586 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF11A-204ENST00000592013 ADAMTS3O15072 1205 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 SKIP12755 728 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 IBSPP21815 317 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 PPM1AP35813 382 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 PSMC5P62195 406 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 CTC1Q2NKJ3 1217 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 TMEM31Q5JXX7 168 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 PPP4R3AQ6IN85 833 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 NEK8Q86SG6 692 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 NLRP7Q8WX94 980 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 MBOAT7Q96N66 472 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 TMEM117Q9H0C3 514 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 CDHR5Q9HBB8 845 aa22.18■■□□□ 1.14
TNFRSF11A-204ENST00000592013 M0R2N6 131 aa22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 TBX3O15119 743 aa22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 ZNF862O60290 1169 aa22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 PFKFB2O60825 505 aa22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 BAG4O95429 457 aaKnown RBP22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 EOMESO95936 686 aa22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 ITGB1P05556 798 aa22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 SFPQP23246 707 aaKnown RBP eCLIP22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 BMS1Q14692 1282 aaKnown RBP22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 LETM2Q2VYF4 491 aa22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 THNSL1Q8IYQ7 743 aa22.17■■□□□ 1.14
TNFRSF11A-204ENST00000592013 SPPL3Q8TCT6 385 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms