RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 FBXO47Q5MNV8 452 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 RNF20Q5VTR2 975 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 ADHFE1Q8IWW8 467 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 DNAJB3Q8WWF6 145 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 CLP1Q92989 425 aaKnown RBP10.76□□□□□ -0.69
BRCA1-226ENST00000591534 P2RX5Q93086 422 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 SLC9A2Q9UBY0 812 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 PCDHA6Q9UN73 950 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 PCDHA8Q9Y5H6 950 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 UBIAD1Q9Y5Z9 338 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 CDY2AQ9Y6F7 541 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 COL4A6Q14031 1691 aa10.76□□□□□ -0.69
BRCA1-226ENST00000591534 GSTTP1A0A1W2PQM5 241 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 FSD2A1L4K1 749 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 SH2B2O14492 632 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-226ENST00000591534 ATP9AO75110 1047 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 IGBP1P78318 339 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 MGAT3Q09327 533 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 PAK2Q13177 524 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 RUFY4Q6ZNE9 571 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 NYAP1Q6ZVC0 841 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 PLPPR4Q7Z2D5 763 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 HEATR3Q7Z4Q2 680 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 NPAS4Q8IUM7 802 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 CMTR2Q8IYT2 770 aaKnown RBP10.75□□□□□ -0.69
BRCA1-226ENST00000591534 SRBD1Q8N5C6 995 aaKnown RBP10.75□□□□□ -0.69
BRCA1-226ENST00000591534 FANCBQ8NB91 859 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 MYL10Q9BUA6 226 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 CD320Q9NPF0 282 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 RBM28Q9NW13 759 aaKnown RBP10.75□□□□□ -0.69
BRCA1-226ENST00000591534 LRFN2Q9ULH4 789 aa10.75□□□□□ -0.69
BRCA1-226ENST00000591534 hCG_1984214I3L0E3 225 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 DGKIO75912 1065 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 PLEKHA8P1O95397 391 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 MMP1P03956 469 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 INSRRP14616 1297 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 STAT5BP51692 787 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 ZP2Q05996 745 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 NR1H3Q13133 447 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 PPP1R18Q6NYC8 613 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 TMTC3Q6ZXV5 915 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 ZNF713Q8N859 430 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-226ENST00000591534 ZNF689Q96CS4 500 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-226ENST00000591534 MFSD14AQ96MC6 490 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 MXRA8Q9BRK3 442 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 LSG1Q9H089 658 aaKnown RBP10.74□□□□□ -0.69
BRCA1-226ENST00000591534 FAM49AQ9H0Q0 323 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-226ENST00000591534 IL21Q9HBE4 155 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 C11orf16Q9NQ32 467 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 AAASQ9NRG9 546 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 KCNH7Q9NS40 1196 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 PKD2L1Q9P0L9 805 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 TCEAL9Q9UHQ7 104 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 PCDHA2Q9Y5H9 948 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 TRPV2Q9Y5S1 764 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 NFASCO94856 1347 aa10.74□□□□□ -0.69
BRCA1-226ENST00000591534 COL4A4P53420 1690 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-226ENST00000591534 SMIM35A0A1B0GVV1 85 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 GRM6O15303 877 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 SCG2P13521 617 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 CD52P31358 61 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 ZNF76P36508 570 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 NDUFV1P49821 464 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 NAPAP54920 295 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 HYAL1Q12794 435 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 SMAD4Q13485 552 aaKnown RBP10.73□□□□□ -0.69
BRCA1-226ENST00000591534 SMAD2Q15796 467 aaKnown RBP10.73□□□□□ -0.69
BRCA1-226ENST00000591534 UBE2SQ16763 222 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 CTC1Q2NKJ3 1217 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 CEP55Q53EZ4 464 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 MARCH8Q5T0T0 291 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 FAM160B1Q5W0V3 765 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 MCTP2Q6DN12 878 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 UCN2Q96RP3 112 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 ESYT1Q9BSJ8 1104 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 CELF4Q9BZC1 486 aaKnown RBP10.73□□□□□ -0.69
BRCA1-226ENST00000591534 SLC6A16Q9GZN6 736 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 IGFLR1Q9H665 355 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 CD207Q9UJ71 328 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 PLAGL2Q9UPG8 496 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 PCDHB7Q9Y5E2 793 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 PCDHB12Q9Y5F1 795 aa10.73□□□□□ -0.69
BRCA1-226ENST00000591534 SIP14410 1827 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 MYH7BA7E2Y1 1941 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 BAZ2BQ9UIF8 2168 aaKnown RBP10.72□□□□□ -0.69
BRCA1-226ENST00000591534 BACH1O14867 736 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 SLC27A2O14975 620 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 EPB41L2O43491 1005 aaKnown RBP10.72□□□□□ -0.69
BRCA1-226ENST00000591534 HBP1O60381 514 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 SRGAP2BP0DMP2 458 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 ADCY7P51828 1080 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 ACTR2P61160 394 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 KRT76Q01546 638 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 UBE3AQ05086 875 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 AP3B2Q13367 1082 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 PKN1Q16512 942 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 CREB3L3Q68CJ9 461 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 PDE12Q6L8Q7 609 aaKnown RBP10.72□□□□□ -0.69
BRCA1-226ENST00000591534 SGMS1Q86VZ5 419 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms