RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 PEX3P56589 373 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 PPM1LQ5SGD2 360 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 WDR18Q9BV38 432 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 RPTORQ8N122 1335 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 LOC102724159A0A0B4J2E5 919 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 ACADMP11310 421 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF165P49910 485 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 PWP2Q15269 919 aaKnown RBP12.37□□□□□ -0.43
SEH1L-208ENST00000590843 BZW1Q7L1Q6 419 aaKnown RBP12.37□□□□□ -0.43
SEH1L-208ENST00000590843 PPM1KQ8N3J5 372 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 NME8Q8N427 588 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 GDAP1Q8TB36 358 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 PSEN2P49810 448 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 CCDC122Q5T0U0 273 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF280DQ6N043 979 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 USP38Q8NB14 1042 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 SPC24Q8NBT2 197 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 ZSWIM5Q9P217 1185 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 CTTNBP2NLQ9P2B4 639 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 DBR1Q9UK59 544 aaKnown RBP12.37□□□□□ -0.43
SEH1L-208ENST00000590843 ODC1P11926 461 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 HSPA4P34932 840 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 STILQ15468 1287 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 PAN2Q504Q3 1202 aaKnown RBP12.37□□□□□ -0.43
SEH1L-208ENST00000590843 RIOX2Q8IUF8 465 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 MAF1Q9H063 256 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 CEMIPQ8WUJ3 1361 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
SEH1L-208ENST00000590843 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
SEH1L-208ENST00000590843 BNIP3LO60238 219 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 SYNCRIPO60506 623 aaKnown RBP12.36□□□□□ -0.43
SEH1L-208ENST00000590843 PPFIA4O75335 1185 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 FAM160A1Q05DH4 1040 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 MFSD10Q14728 455 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 BACH2Q9BYV9 841 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 FEZ2Q9UHY8 353 aaPredicted RBP12.36□□□□□ -0.43
SEH1L-208ENST00000590843 TBC1D12O60347 775 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 GPR142Q7Z601 462 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 RIT2Q99578 217 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.36□□□□□ -0.43
SEH1L-208ENST00000590843 RAB20Q9NX57 234 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 TJP2Q9UDY2 1190 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 TRPV2Q9Y5S1 764 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 S100BP04271 92 aaPredicted RBP12.36□□□□□ -0.43
SEH1L-208ENST00000590843 AVPR1AP37288 418 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 GRIK1P39086 918 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 TMEM132DQ14C87 1099 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 ACCSLQ4AC99 568 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
SEH1L-208ENST00000590843 CENPHQ9H3R5 247 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 HIPK3Q9H422 1215 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 TBX3O15119 743 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 ALDH1A2O94788 518 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 IL18RAPO95256 599 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 IGHDP01880 384 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 PPP4R3CPQ6ZMV5 832 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 CNGA4Q8IV77 575 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 SYCE1Q8N0S2 351 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
SEH1L-208ENST00000590843 INHAP05111 366 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 ADD1P35611 737 aaKnown RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 ADAM9Q13443 819 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 KIAA1755Q5JYT7 1200 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF746Q6NUN9 644 aaPredicted RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 SNAP23O00161 211 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 RBP5P82980 135 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 CALCOCO2Q13137 446 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 BYSLQ13895 437 aaKnown RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 SRBD1Q8N5C6 995 aaKnown RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 GMCL1Q96IK5 515 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 MOV10L1Q9BXT6 1211 aaKnown RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 TLL2Q9Y6L7 1015 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 NCK2O43639 380 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 PFKMP08237 780 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 HLTFQ14527 1009 aaKnown RBP eCLIP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 MGAT5BQ3V5L5 792 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 ARL6IP4Q66PJ3 421 aaKnown RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 UXTQ9UBK9 157 aaPredicted RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF541Q9H0D2 1346 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 IRS2Q9Y4H2 1338 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 SLC9A3R1O14745 358 aaPredicted RBP12.35□□□□□ -0.43
SEH1L-208ENST00000590843 FGF19O95750 216 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 SOX10P56693 466 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 EFCAB12Q6NXP0 572 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF365Q70YC5 407 aa12.35□□□□□ -0.43
SEH1L-208ENST00000590843 IRF6O14896 467 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 PLA2G4BP0C869 781 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 AXLP30530 894 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 ARHGAP44Q17R89 818 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF699Q32M78 642 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 ATAT1Q5SQI0 421 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms