RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 XKR9Q5GH70 373 aa23.52■■□□□ 1.36
CIRBP-229ENST00000590704 NACC1Q96RE7 527 aa23.52■■□□□ 1.36
CIRBP-229ENST00000590704 RAB34Q9BZG1 259 aa23.52■■□□□ 1.36
CIRBP-229ENST00000590704 CCSER1Q9C0I3 900 aa23.52■■□□□ 1.36
CIRBP-229ENST00000590704 DDX19AQ9NUU7 478 aaKnown RBP23.52■■□□□ 1.36
CIRBP-229ENST00000590704 LOXHD1Q8IVV2 1947 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 A0A087X0B3 334 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 CTSHP09668 335 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 ACRP10323 421 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 TMEM62Q0P6H9 643 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 TMEM240Q5SV17 173 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 KRT79Q5XKE5 535 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 HAUS3Q68CZ6 603 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 OTUD6AQ7L8S5 288 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 ERMNQ8TAM6 284 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 ADAMTS10Q9H324 1103 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 BLOC1S4Q9NUP1 217 aa23.51■■□□□ 1.35
CIRBP-229ENST00000590704 RSPH10B2B2RC85 870 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 VTNP04004 478 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 RSPH10BP0C881 870 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 NUCB2P80303 420 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 TBC1D8BQ0IIM8 1120 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 C9orf50Q5SZB4 431 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 CABP7Q86V35 215 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 NME8Q8N427 588 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 TMEM199Q8N511 208 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 KRI1Q8N9T8 703 aaKnown RBP23.5■■□□□ 1.35
CIRBP-229ENST00000590704 RETREG2Q8NC44 543 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 TMEM40Q8WWA1 233 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 PLIN2Q99541 437 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.5■■□□□ 1.356e-8■■□□□ 11.6
CIRBP-229ENST00000590704 PCDHA7Q9UN72 937 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 PPME1Q9Y570 386 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 CDY2AQ9Y6F7 541 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 KDM3AQ9Y4C1 1321 aa23.5■■□□□ 1.35
CIRBP-229ENST00000590704 MRPS6P82932 125 aaKnown RBP23.49■■□□□ 1.35
CIRBP-229ENST00000590704 FPGSQ05932 587 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 STK38Q15208 465 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 SHC4Q6S5L8 630 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 CHRDL2Q6WN34 429 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 METTL13Q8N6R0 699 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 LEO1Q8WVC0 666 aaPredicted RBP23.49■■□□□ 1.35
CIRBP-229ENST00000590704 SYMPKQ92797 1274 aaKnown RBP23.49■■□□□ 1.35
CIRBP-229ENST00000590704 SUGCTQ9HAC7 445 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 IL23AQ9NPF7 189 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 COLQQ9Y215 455 aaPredicted RBP23.49■■□□□ 1.35
CIRBP-229ENST00000590704 KARSQ15046 597 aaKnown RBP23.49■■□□□ 1.35
CIRBP-229ENST00000590704 NAALADL2Q58DX5 795 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 CCDC155Q8N6L0 562 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 CELF4Q9BZC1 486 aaKnown RBP23.49■■□□□ 1.35
CIRBP-229ENST00000590704 AGO3Q9H9G7 860 aaKnown RBP23.49■■□□□ 1.35
CIRBP-229ENST00000590704 BMP2KQ9NSY1 1161 aaPredicted RBP23.49■■□□□ 1.35
CIRBP-229ENST00000590704 STK24Q9Y6E0 443 aa23.49■■□□□ 1.35
CIRBP-229ENST00000590704 EYA4O95677 639 aa23.48■■□□□ 1.35
CIRBP-229ENST00000590704 LPIN1Q14693 890 aa23.48■■□□□ 1.35
CIRBP-229ENST00000590704 SHHQ15465 462 aa23.48■■□□□ 1.35
CIRBP-229ENST00000590704 FBXO47Q5MNV8 452 aa23.48■■□□□ 1.35
CIRBP-229ENST00000590704 RASIP1Q5U651 963 aa23.48■■□□□ 1.35
CIRBP-229ENST00000590704 ZNF365Q70YC5 407 aa23.48■■□□□ 1.35
CIRBP-229ENST00000590704 TMEM143Q96AN5 459 aa23.48■■□□□ 1.35
CIRBP-229ENST00000590704 LBHD1Q9BQE6 289 aaPredicted RBP23.48■■□□□ 1.35
CIRBP-229ENST00000590704 BHMT2Q9H2M3 363 aa23.48■■□□□ 1.35
CIRBP-229ENST00000590704 CIZ1Q9ULV3 898 aaPredicted RBP23.48■■□□□ 1.35
CIRBP-229ENST00000590704 TRIOBPQ9H2D6 2365 aa23.47■■□□□ 1.35
CIRBP-229ENST00000590704 SLC26A4O43511 780 aa23.47■■□□□ 1.35
CIRBP-229ENST00000590704 RFC5P40937 340 aa23.47■■□□□ 1.35
CIRBP-229ENST00000590704 SLC12A3P55017 1021 aa23.47■■□□□ 1.35
CIRBP-229ENST00000590704 EMC2Q15006 297 aa23.47■■□□□ 1.35
CIRBP-229ENST00000590704 PLEKHG4Q58EX7 1191 aa23.47■■□□□ 1.35
CIRBP-229ENST00000590704 DEFB128Q7Z7B8 93 aa23.47■■□□□ 1.35
CIRBP-229ENST00000590704 KSR1Q8IVT5 923 aa23.47■■□□□ 1.35
CIRBP-229ENST00000590704 ZNF668Q96K58 619 aaPredicted RBP23.47■■□□□ 1.35
CIRBP-229ENST00000590704 CFAP45Q9UL16 551 aa23.47■■□□□ 1.35
CIRBP-229ENST00000590704 RFC2P35250 354 aa23.46■■□□□ 1.35
CIRBP-229ENST00000590704 ARL2P36404 184 aa23.46■■□□□ 1.35
CIRBP-229ENST00000590704 GPC3P51654 580 aa23.46■■□□□ 1.35
CIRBP-229ENST00000590704 PPIGQ13427 754 aaKnown RBP eCLIP23.46■■□□□ 1.353e-9■■■□□ 14.7
CIRBP-229ENST00000590704 KIZQ2M2Z5 673 aa23.46■■□□□ 1.35
CIRBP-229ENST00000590704 C1orf186Q6ZWK4 172 aa23.46■■□□□ 1.35
CIRBP-229ENST00000590704 PPP1R16BQ96T49 567 aa23.46■■□□□ 1.35
CIRBP-229ENST00000590704 POLD4Q9HCU8 107 aa23.46■■□□□ 1.35
CIRBP-229ENST00000590704 GPRC5CQ9NQ84 441 aa23.46■■□□□ 1.35
CIRBP-229ENST00000590704 TRPV2Q9Y5S1 764 aa23.46■■□□□ 1.35
CIRBP-229ENST00000590704 CUTAO60888 179 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 DGAT1O75907 488 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 CYP11B2P19099 503 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 PLCG1P19174 1290 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 UBA7P41226 1012 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 NLRP11P59045 1033 aaKnown RBP23.45■■□□□ 1.34
CIRBP-229ENST00000590704 ARSHQ5FYA8 562 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 PADI6Q6TGC4 694 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 DAW1Q8N136 415 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 KCTD17Q8N5Z5 321 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 SYT2Q8N9I0 419 aaPredicted RBP23.45■■□□□ 1.34
CIRBP-229ENST00000590704 DBF4BQ8NFT6 615 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 KCNG4Q8TDN1 519 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 PRPF31Q8WWY3 499 aaKnown RBP23.45■■□□□ 1.34
CIRBP-229ENST00000590704 SUCLA2Q9P2R7 463 aaPredicted RBP23.45■■□□□ 1.34
CIRBP-229ENST00000590704 DNM3Q9UQ16 869 aa23.45■■□□□ 1.34
CIRBP-229ENST00000590704 USO1O60763 962 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms