RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 CEP170P1Q96L14 293 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 CCDC43Q96MW1 224 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 NIFKQ9BYG3 293 aaKnown RBP15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 ZNF576Q9H609 170 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 ZSWIM4Q9H7M6 989 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 CYP26B1Q9NR63 512 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 PCDHA11Q9Y5I1 949 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 SCN5AQ14524 2016 aa15.72■□□□□ 0.11
SCAMP4-212ENST00000590266 ZBTB39O15060 712 aa15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 POLGP54098 1239 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 NLRP11P59045 1033 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 NFX1Q12986 1120 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 ORC2Q13416 577 aaPredicted RBP15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 DRP2Q13474 957 aa15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 TARBP2Q15633 366 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 XKR9Q5GH70 373 aa15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 OTUD6AQ7L8S5 288 aa15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 FERMT3Q86UX7 667 aa15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 ZNF579Q8NAF0 562 aaKnown RBP15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 NLRP7Q8WX94 980 aa15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 PADI3Q9ULW8 664 aa15.71■□□□□ 0.11
SCAMP4-212ENST00000590266 A0A087WWV3 80 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 RPS6KA5O75582 802 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 SLITRK3O94933 977 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 HSP90AA1P07900 732 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 DNM2P50570 870 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 PTGDRQ13258 359 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 RILPL1Q5EBL4 403 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 C4orf19Q8IY42 314 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 PIGOQ8TEQ8 1089 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 TMEM40Q8WWA1 233 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 SLC7A3Q8WY07 619 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 CERS4Q9HA82 394 aa15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 NOC2LQ9Y3T9 749 aaKnown RBP15.7■□□□□ 0.1
SCAMP4-212ENST00000590266 LAMA2P24043 3122 aaKnown RBP15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 LCHNA4D1U4 455 aa15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 GPR32O75388 356 aa15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 PDCP20941 246 aa15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 CRYBB1P53674 252 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 GRIN2CQ14957 1233 aa15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 RHPN2Q8IUC4 686 aa15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 LINC01465Q8N7H1 131 aa15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 ERMNQ8TAM6 284 aa15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 NEK9Q8TD19 979 aa15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 HSD17B14Q9BPX1 270 aa15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 SUCLA2Q9P2R7 463 aaPredicted RBP15.69■□□□□ 0.1
SCAMP4-212ENST00000590266 KDM3AQ9Y4C1 1321 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 MAFO75444 373 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 MED24O75448 989 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 GJB5O95377 273 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 GPC3P51654 580 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 MKRN4PQ13434 485 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 C4orf32Q8N8J7 132 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 SPRYD3Q8NCJ5 442 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 TMEM143Q96AN5 459 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 NLRP4Q96MN2 994 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 CEP89Q96ST8 783 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 YME1L1Q96TA2 773 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 RAD9AQ99638 391 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 JPH2Q9BR39 696 aaPredicted RBP15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 PRDM12Q9H4Q4 367 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 LRWD1Q9UFC0 647 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 ST3GAL5Q9UNP4 418 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 SQORQ9Y6N5 450 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 COL6A3P12111 3177 aa15.68■□□□□ 0.1
SCAMP4-212ENST00000590266 DENND3A2RUS2 1198 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 ENPP3O14638 875 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 GPR182O15218 404 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 CSDE1O75534 798 aaKnown RBP15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 ARHGEF15O94989 841 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 SYT1P21579 422 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 FGFR4P22455 802 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 CCT6AP40227 531 aaKnown RBP15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 RFC5P40937 340 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 EMC2Q15006 297 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 POTEGQ6S5H5 508 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 FAM228AQ86W67 206 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 CATSPER3Q86XQ3 398 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 KSR1Q8IVT5 923 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 LINC01599Q8WXQ3 324 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 SNX21Q969T3 373 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 INTS4Q96HW7 963 aaKnown RBP15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 GAS2L1Q99501 681 aaPredicted RBP15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 ADAMTS10Q9H324 1103 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 MTUS1Q9ULD2 1270 aa15.67■□□□□ 0.1
SCAMP4-212ENST00000590266 A0A087WZ62 844 aa15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 IGKV6-21A0A0C4DH24 114 aa15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 PP2D1A8MPX8 630 aa15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 USO1O60763 962 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 SPATA31C1P0DKV0 1188 aa15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 ZRSR1Q15695 479 aaKnown RBP15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 ODR4Q5SWX8 454 aa15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 HAUS3Q68CZ6 603 aa15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 DTHD1Q6ZMT9 781 aa15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 MAEAQ7L5Y9 396 aa15.66■□□□□ 0.1
SCAMP4-212ENST00000590266 BRAPQ7Z569 592 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms