RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 ANO3Q9BYT9 981 aa17.33■□□□□ 0.36
ACTN4-211ENST00000589528 NGRNQ9NPE2 291 aaKnown RBP17.33■□□□□ 0.36
ACTN4-211ENST00000589528 RIC8AQ9NPQ8 531 aa17.33■□□□□ 0.36
ACTN4-211ENST00000589528 CACNA1HO95180 2353 aa17.33■□□□□ 0.36
ACTN4-211ENST00000589528 ATG7O95352 703 aa17.32■□□□□ 0.36
ACTN4-211ENST00000589528 HOXB8P17481 243 aaPredicted RBP17.32■□□□□ 0.36
ACTN4-211ENST00000589528 PPM1AP35813 382 aa17.32■□□□□ 0.36
ACTN4-211ENST00000589528 CRYBB1P53674 252 aaPredicted RBP17.32■□□□□ 0.36
ACTN4-211ENST00000589528 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
ACTN4-211ENST00000589528 MIS18BP1Q6P0N0 1132 aa17.32■□□□□ 0.36
ACTN4-211ENST00000589528 TRMT1LQ7Z2T5 733 aaKnown RBP17.32■□□□□ 0.36
ACTN4-211ENST00000589528 TMC7Q7Z402 723 aa17.32■□□□□ 0.36
ACTN4-211ENST00000589528 TMEM117Q9H0C3 514 aa17.32■□□□□ 0.36
ACTN4-211ENST00000589528 CWH43Q9H720 699 aa17.32■□□□□ 0.36
ACTN4-211ENST00000589528 ELAC1Q9H777 363 aaKnown RBP17.32■□□□□ 0.36
ACTN4-211ENST00000589528 WDR81Q562E7 1941 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 VTNP04004 478 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 PLCB3Q01970 1234 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 MTMR3Q13615 1198 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 BMS1Q14692 1282 aaKnown RBP17.31■□□□□ 0.36
ACTN4-211ENST00000589528 CES5AQ6NT32 575 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 SWSAP1Q6NVH7 229 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 PPP1R18Q6NYC8 613 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 ABHD15Q6UXT9 468 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 TMEM184AQ6ZMB5 413 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 FAM228AQ86W67 206 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 CCDC60Q8IWA6 550 aaPredicted RBP17.31■□□□□ 0.36
ACTN4-211ENST00000589528 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 LRRC43Q8N309 656 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 CASP10Q92851 521 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 ZNF558Q96NG5 402 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 S1PR5Q9H228 398 aa17.31■□□□□ 0.36
ACTN4-211ENST00000589528 RBM28Q9NW13 759 aaKnown RBP17.31■□□□□ 0.36
ACTN4-211ENST00000589528 CNTNAP5Q8WYK1 1306 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 IGKV6D-21A0A0A0MT36 114 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 H0Y858 1186 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 MEIS1O00470 390 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 CCNE2O96020 404 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 ZSCAN20P17040 1043 aaPredicted RBP17.3■□□□□ 0.36
ACTN4-211ENST00000589528 AP3B2Q13367 1082 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 SYCE2Q6PIF2 218 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 KCNT2Q6UVM3 1135 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 PLA2G4DQ86XP0 818 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 TMEM87AQ8NBN3 555 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 RNF169Q8NCN4 708 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 KREMEN2Q8NCW0 462 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 RIPOR3Q96MK2 946 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 GLT8D2Q9H1C3 349 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 AKT3Q9Y243 479 aa17.3■□□□□ 0.36
ACTN4-211ENST00000589528 PTPRZ1P23471 2315 aaPredicted RBP17.3■□□□□ 0.36
ACTN4-211ENST00000589528 SMCO2A6NFE2 343 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 HIDE1A8MVS5 230 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 SLC27A2O14975 620 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 C22orf31O95567 290 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 SREBF1P36956 1147 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 PBX3P40426 434 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 NUBP1P53384 320 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 NIPA1Q7RTP0 329 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
ACTN4-211ENST00000589528 BBXQ8WY36 941 aaPredicted RBP17.29■□□□□ 0.36
ACTN4-211ENST00000589528 SCLT1Q96NL6 688 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 NECTIN4Q96NY8 510 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 MAP7D2Q96T17 732 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 SPG21Q9NZD8 308 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 CEP131Q9UPN4 1083 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 SORCS3Q9UPU3 1222 aa17.29■□□□□ 0.36
ACTN4-211ENST00000589528 IPO5O00410 1097 aaKnown RBP17.28■□□□□ 0.36
ACTN4-211ENST00000589528 PDGFBP01127 241 aaPredicted RBP17.28■□□□□ 0.36
ACTN4-211ENST00000589528 TMOD1P28289 359 aa17.28■□□□□ 0.36
ACTN4-211ENST00000589528 ITIH3Q06033 890 aa17.28■□□□□ 0.36
ACTN4-211ENST00000589528 KCNC3Q14003 757 aa17.28■□□□□ 0.36
ACTN4-211ENST00000589528 SMC1AQ14683 1233 aaKnown RBP17.28■□□□□ 0.36
ACTN4-211ENST00000589528 TYW1BQ6NUM6 668 aa17.28■□□□□ 0.36
ACTN4-211ENST00000589528 UBALD2Q8IYN6 164 aa17.28■□□□□ 0.36
ACTN4-211ENST00000589528 CASD1Q96PB1 797 aa17.28■□□□□ 0.36
ACTN4-211ENST00000589528 ZNF577Q9BSK1 485 aa17.28■□□□□ 0.36
ACTN4-211ENST00000589528 SAMM50Q9Y512 469 aa17.28■□□□□ 0.36
ACTN4-211ENST00000589528 V9GY48 417 aaPredicted RBP17.28■□□□□ 0.36
ACTN4-211ENST00000589528 PLXNA3P51805 1871 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 ZFHX2Q9C0A1 2572 aaPredicted RBP17.27■□□□□ 0.36
ACTN4-211ENST00000589528 ZBTB42B2RXF5 422 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 GALR2O43603 387 aaPredicted RBP17.27■□□□□ 0.36
ACTN4-211ENST00000589528 GPR32O75388 356 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 PSAPP07602 524 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 CLCN3P51790 818 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 FAM189BP81408 668 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 RTN1Q16799 776 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 CREB3L3Q68CJ9 461 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 APOA5Q6Q788 366 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 SGMS1Q86VZ5 419 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 YTHDC1Q96MU7 727 aaKnown RBP17.27■□□□□ 0.36
ACTN4-211ENST00000589528 MFSD1Q9H3U5 465 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 TBC1D22BQ9NU19 505 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 HCFC2Q9Y5Z7 792 aa17.27■□□□□ 0.36
ACTN4-211ENST00000589528 C2CD4DB7Z1M9 353 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 MAGEB2O15479 319 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 ZBTB43O43298 467 aa17.26■□□□□ 0.35
ACTN4-211ENST00000589528 MTHFRP42898 656 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms