RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 RPS6KA5O75582 802 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 CIITAP33076 1130 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 NDUFV1P49821 464 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 SLC26A2P50443 739 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 NHLH1Q02575 133 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 CBX2Q14781 532 aaPredicted RBP12.52□□□□□ -0.41
MRPL54-202ENST00000589174 NAALADL2Q58DX5 795 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 IER5LQ5T953 404 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 LRRC71Q8N4P6 559 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 ZNF713Q8N859 430 aaPredicted RBP12.52□□□□□ -0.41
MRPL54-202ENST00000589174 COLGALT1Q8NBJ5 622 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 SUSD6Q92537 303 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 SNX14Q9Y5W7 946 aa12.52□□□□□ -0.41
MRPL54-202ENST00000589174 HIDE1A8MVS5 230 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 DTNBO60941 627 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 FGF18O76093 207 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 STAG3L1P0CL83 205 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 FGFR4P22455 802 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 RCAN1P53805 252 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 NPY5RQ15761 445 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 DUSP6Q16828 381 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 ZNF484Q5JVG2 852 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 CLLU1OSQ5K130 101 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 SYCE2Q6PIF2 218 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 Q6ZUG5 572 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 SLC24A5Q71RS6 500 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 PRSS33Q8NF86 280 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 BRF1Q92994 677 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 ZNF577Q9BSK1 485 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 S1PR5Q9H228 398 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 GABBR1Q9UBS5 961 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 DENND4AQ7Z401 1863 aa12.51□□□□□ -0.41
MRPL54-202ENST00000589174 M0QZ92 97 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 MSH4O15457 936 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 PRPF3O43395 683 aaKnown RBP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 CSDE1O75534 798 aaKnown RBP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 RPLP2P05387 115 aaKnown RBP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 HSPA4P34932 840 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 ZNF76P36508 570 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 METAP2P50579 478 aaKnown RBP eCLIP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 CRYBB1P53674 252 aaPredicted RBP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 TARBP2Q15633 366 aaKnown RBP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 PRR16Q569H4 304 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 FAM160B1Q5W0V3 765 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 ZNF746Q6NUN9 644 aaPredicted RBP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 B3GNT9Q6UX72 402 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 SYNE3Q6ZMZ3 975 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 ZNF598Q86UK7 904 aaKnown RBP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 TEX2Q8IWB9 1127 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 EDAQ92838 391 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 NCOA5Q9HCD5 579 aaKnown RBP12.5□□□□□ -0.41
MRPL54-202ENST00000589174 VPS54Q9P1Q0 977 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 PCDHB7Q9Y5E2 793 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 PLXNA3P51805 1871 aa12.5□□□□□ -0.41
MRPL54-202ENST00000589174 MEIS3P2A8K0S8 358 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 M0R2N6 131 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 B4GALT3O60512 393 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 NLRP11P59045 1033 aaKnown RBP12.49□□□□□ -0.41
MRPL54-202ENST00000589174 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 PLPP4Q5VZY2 271 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 MIS18BP1Q6P0N0 1132 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 TMEM173Q86WV6 379 aaPredicted RBP12.49□□□□□ -0.41
MRPL54-202ENST00000589174 ECHDC2Q86YB7 292 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 FBXL16Q8N461 479 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 JAKMIP1Q96N16 626 aaKnown RBP12.49□□□□□ -0.41
MRPL54-202ENST00000589174 AIFM3Q96NN9 605 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 SH2D3AQ9BRG2 576 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 APOL5Q9BWW9 433 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 UNC45AQ9H3U1 944 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 TLR9Q9NR96 1032 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 C1orf112Q9NSG2 853 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 TMEM161AQ9NX61 479 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 USP34Q70CQ2 3546 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 PIEZO1Q92508 2521 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 C2orf16Q68DN1 1984 aa12.49□□□□□ -0.41
MRPL54-202ENST00000589174 ARID2Q68CP9 1835 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 DENND3A2RUS2 1198 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 CDC45O75419 566 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 MRE11P49959 708 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 GPC3P51654 580 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 EVCP57679 992 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 TOB2Q14106 344 aaPredicted RBP12.48□□□□□ -0.41
MRPL54-202ENST00000589174 EFCAB12Q6NXP0 572 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 KANK3Q6NY19 840 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 TMEM184AQ6ZMB5 413 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 REXO1Q8N1G1 1221 aaKnown RBP12.48□□□□□ -0.41
MRPL54-202ENST00000589174 METTL13Q8N6R0 699 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 SLC5A5Q92911 643 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 ASIC4Q96FT7 647 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 LARP6Q9BRS8 491 aaKnown RBP12.48□□□□□ -0.41
MRPL54-202ENST00000589174 ELAC1Q9H777 363 aaKnown RBP12.48□□□□□ -0.41
MRPL54-202ENST00000589174 TLE6Q9H808 572 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 TBC1D22BQ9NU19 505 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 FAM50BQ9Y247 325 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 PCDHA10Q9Y5I2 948 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 ZDBF2Q9HCK1 2354 aa12.48□□□□□ -0.41
MRPL54-202ENST00000589174 GPR182O15218 404 aa12.47□□□□□ -0.41
MRPL54-202ENST00000589174 PSMD10O75832 226 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms