RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 SERINC5Q86VE9 423 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 EXOC8Q8IYI6 725 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 SYT2Q8N9I0 419 aaPredicted RBP17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 IQUBQ8NA54 791 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 RETREG2Q8NC44 543 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 JPH2Q9BR39 696 aaPredicted RBP17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 PYM1Q9BRP8 204 aaKnown RBP17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 DHX33Q9H6R0 707 aaKnown RBP17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 SUGCTQ9HAC7 445 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 ATP6V0A4Q9HBG4 840 aa17.22■□□□□ 0.35
RPRD1A-208ENST00000589050 FAM237AA0A1B0GTK4 181 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 CLTBP09497 229 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 SYKP43405 635 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 SLC12A3P55017 1021 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 E2F4Q16254 413 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 EFCAB12Q6NXP0 572 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 TAF2Q6P1X5 1199 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 LRRC71Q8N4P6 559 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 MTRQ99707 1265 aa17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 FAM49AQ9H0Q0 323 aaPredicted RBP17.21■□□□□ 0.35
RPRD1A-208ENST00000589050 KIAA0100Q14667 2235 aaKnown RBP17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 IGKV6-21A0A0C4DH24 114 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 SMIM35A0A1B0GVV1 85 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 TMOD1P28289 359 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 DNM2P50570 870 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 CLCN3P51790 818 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 UBE2HP62256 183 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 RINT1Q6NUQ1 792 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 SV2BQ7L1I2 683 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 DNAJB3Q8WWF6 145 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 DHX38Q92620 1227 aaKnown RBP17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 WNT8BQ93098 351 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 RUSC1Q9BVN2 902 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 CUEDC2Q9H467 287 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 TMEM39AQ9NV64 488 aa17.2■□□□□ 0.34
RPRD1A-208ENST00000589050 TCHHQ07283 1943 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 GAS2O43903 313 aaKnown RBP17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 CYP11B2P19099 503 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 RSPH3Q86UC2 560 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 CEP57L1Q8IYX8 460 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 C7orf61Q8IZ16 206 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 KIAA0319LQ8IZA0 1049 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 CCDC155Q8N6L0 562 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 LINC01465Q8N7H1 131 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 MCPH1Q8NEM0 835 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 DPF3Q92784 378 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 TMEM143Q96AN5 459 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 MAP7D2Q96T17 732 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 XPNPEP1Q9NQW7 623 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 PRDM5Q9NQX1 630 aaPredicted RBP17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 PDLIM7Q9NR12 457 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 SERTAD1Q9UHV2 236 aa17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 MYH9P35579 1960 aaKnown RBP17.19■□□□□ 0.34
RPRD1A-208ENST00000589050 ACTN4O43707 911 aaKnown RBP17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 EVI5O60447 810 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 ZNF202O95125 648 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 RPLP2P05387 115 aaKnown RBP17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 THPOP40225 353 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 FAM160A1Q05DH4 1040 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 RAD51AP2Q09MP3 1159 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 MKRN4PQ13434 485 aaPredicted RBP17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 DRP2Q13474 957 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 BFSP2Q13515 415 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 LONRF3Q496Y0 759 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 FAM102BQ5T8I3 360 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 C1orf186Q6ZWK4 172 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 SH3RF1Q7Z6J0 888 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 TCP11Q8WWU5 503 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 HIPK3Q9H422 1215 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 MAGEF1Q9HAY2 307 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 KCND2Q9NZV8 630 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 SUCLA2Q9P2R7 463 aaPredicted RBP17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 USP25Q9UHP3 1055 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 TBX21Q9UL17 535 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 AKT3Q9Y243 479 aa17.18■□□□□ 0.34
RPRD1A-208ENST00000589050 WDR81Q562E7 1941 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 NPHP3-ACAD11A0A0J9YXS1 232 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 VTNP04004 478 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 SLFN14P0C7P3 912 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 LIG1P18858 919 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 ARSHQ5FYA8 562 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 IER5Q5VY09 327 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 RPAINQ86UA6 219 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 FMR1NBQ8N0W7 255 aaPredicted RBP17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 NME8Q8N427 588 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 ENGASEQ8NFI3 743 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 STAMQ92783 540 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 NOC4LQ9BVI4 516 aaKnown RBP17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 POLR3FQ9H1D9 316 aaPredicted RBP17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 TNMDQ9H2S6 317 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 GPRC5CQ9NQ84 441 aa17.17■□□□□ 0.34
RPRD1A-208ENST00000589050 TRIM43BA6NCK2 446 aa17.16■□□□□ 0.34
RPRD1A-208ENST00000589050 HIP1RO75146 1068 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms