RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 KIAA0319LQ8IZA0 1049 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 POF1BQ8WVV4 589 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 MAP6Q96JE9 813 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 HHIPL1Q96JK4 782 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 TUBGCP5Q96RT8 1024 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 MYL10Q9BUA6 226 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 KRTAP4-6Q9BYQ5 205 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 KCTD10Q9H3F6 313 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 IFT122Q9HBG6 1241 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 RTEL1Q9NZ71 1219 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 ANAPC4Q9UJX5 808 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 POLHQ9Y253 713 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 PITPNM2Q9BZ72 1349 aa9.44□□□□□ -0.9
VMP1-208ENST00000588617 UBA6A0AVT1 1052 aaPredicted RBP9.43□□□□□ -0.9
VMP1-208ENST00000588617 HGSO14964 777 aaPredicted RBP9.43□□□□□ -0.9
VMP1-208ENST00000588617 NTRK1P04629 796 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 TM4SF4P48230 202 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 CDK17Q00537 523 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 SLC9A5Q14940 896 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 HSF5Q4G112 596 aaPredicted RBP9.43□□□□□ -0.9
VMP1-208ENST00000588617 EMC4Q5J8M3 183 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 NPNTQ6UXI9 565 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 SLCO6A1Q86UG4 719 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 MYLK4Q86YV6 388 aaPredicted RBP9.43□□□□□ -0.9
VMP1-208ENST00000588617 SGCZQ96LD1 299 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 GBP4Q96PP9 640 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 METTL22Q9BUU2 404 aaPredicted RBP9.43□□□□□ -0.9
VMP1-208ENST00000588617 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
VMP1-208ENST00000588617 OSBPL1AQ9BXW6 950 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 WNT8AQ9H1J5 351 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 RSAD1Q9HA92 442 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 FBLN5Q9UBX5 448 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 L1RE1Q9UN81 338 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 SNX11Q9Y5W9 270 aa9.43□□□□□ -0.9
VMP1-208ENST00000588617 TMEM265A0A087WTH1 108 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 GOLIM4O00461 696 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 PRPF6O94906 941 aaKnown RBP9.42□□□□□ -0.9
VMP1-208ENST00000588617 PROCP04070 461 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 ALDH2P05091 517 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 MMEP08473 750 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 TACR1P25103 407 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 CACNB3P54284 484 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 LGALS4P56470 323 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 BCAR1P56945 870 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 CORO7P57737 925 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 TTC38Q5R3I4 469 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 RNF43Q68DV7 783 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 PLD6Q8N2A8 252 aaKnown RBP9.42□□□□□ -0.9
VMP1-208ENST00000588617 MAML3Q96JK9 1138 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 SELENOOQ9BVL4 669 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 PRDM12Q9H4Q4 367 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 TRMT13Q9NUP7 481 aaKnown RBP9.42□□□□□ -0.9
VMP1-208ENST00000588617 MYOTQ9UBF9 498 aa9.42□□□□□ -0.9
VMP1-208ENST00000588617 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 CCDC154A6NI56 674 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 MSTNO14793 375 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 TADA3O75528 432 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 TYRP1P17643 537 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 HTR1BP28222 390 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 PEX2P28328 305 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 CCT2P78371 535 aaKnown RBP9.41□□□□□ -0.9
VMP1-208ENST00000588617 HIPK4Q8NE63 616 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 NETO1Q8TDF5 533 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 ASB15Q8WXK1 588 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 G6PC3Q9BUM1 346 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 NGRNQ9NPE2 291 aaKnown RBP9.41□□□□□ -0.9
VMP1-208ENST00000588617 IPPQ9Y573 584 aa9.41□□□□□ -0.9
VMP1-208ENST00000588617 RTP1P59025 263 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 TRIM14Q14142 442 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 ANO6Q4KMQ2 910 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 TRIM48Q8IWZ4 208 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 PHOSPHO1Q8TCT1 267 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 TSPEARQ8WU66 669 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 CLEC4DQ8WXI8 215 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 CGRRF1Q99675 332 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 LRFN3Q9BTN0 628 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 ACE2Q9BYF1 805 aaPredicted RBP9.4□□□□□ -0.9
VMP1-208ENST00000588617 IMPACTQ9P2X3 320 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 ASH2LQ9UBL3 628 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 LIMCH1Q9UPQ0 1083 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 LZTS1Q9Y250 596 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 NUMBLQ9Y6R0 609 aa9.4□□□□□ -0.9
VMP1-208ENST00000588617 A0A1W2PQJ5 194 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 CAPN8A6NHC0 703 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 BTKQ06187 659 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 LMOD3Q0VAK6 560 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 TRIM25Q14258 630 aaKnown RBP9.39□□□□□ -0.91
VMP1-208ENST00000588617 CNN3Q15417 329 aaKnown RBP9.39□□□□□ -0.91
VMP1-208ENST00000588617 PRAMEF9Q5VWM5 478 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 RTN4RL1Q86UN2 441 aaPredicted RBP9.39□□□□□ -0.91
VMP1-208ENST00000588617 ALYREFQ86V81 257 aaKnown RBP9.39□□□□□ -0.91
VMP1-208ENST00000588617 CILP2Q8IUL8 1156 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 DEPTORQ8TB45 409 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 RIN2Q8WYP3 895 aaPredicted RBP9.39□□□□□ -0.91
VMP1-208ENST00000588617 FOXRED1Q96CU9 486 aaPredicted RBP9.39□□□□□ -0.91
VMP1-208ENST00000588617 ASIC4Q96FT7 647 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 NUP62CLQ9H1M0 184 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 PDLIM7Q9NR12 457 aa9.39□□□□□ -0.91
VMP1-208ENST00000588617 ZC3H7BQ9UGR2 993 aaKnown RBP9.39□□□□□ -0.91
VMP1-208ENST00000588617 TMPRSS11EQ9UL52 423 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms