RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 RHOBTB2Q9BYZ6 727 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 AGO3Q9H9G7 860 aaKnown RBP8.21□□□□□ -1.1
TPM4-210ENST00000588507 LMAN1LQ9HAT1 526 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 SETD4Q9NVD3 440 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 CLIP2Q9UDT6 1046 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 ISY1Q9ULR0 285 aaKnown RBP8.21□□□□□ -1.1
TPM4-210ENST00000588507 NDRG2Q9UN36 371 aaKnown RBP8.21□□□□□ -1.1
TPM4-210ENST00000588507 IRAK3Q9Y616 596 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 FNDC1Q4ZHG4 1894 aaPredicted RBP8.21□□□□□ -1.1
TPM4-210ENST00000588507 KIAA1217Q5T5P2 1943 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 LOXHD1Q8IVV2 1947 aa8.21□□□□□ -1.1
TPM4-210ENST00000588507 CCDC195A0A1B0GUA6 201 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 TEX51A0A1B0GUA7 166 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 H3BRB1 525 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 K7ESF4 209 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 C2CD2LO14523 706 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 APAF1O14727 1248 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 IDH1O75874 414 aaKnown RBP8.2□□□□□ -1.1
TPM4-210ENST00000588507 PAPSS2O95340 614 aaPredicted RBP8.2□□□□□ -1.1
TPM4-210ENST00000588507 CAVIN2O95810 425 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 POU3F2P20265 443 aaPredicted RBP8.2□□□□□ -1.1
TPM4-210ENST00000588507 ALDH7A1P49419 539 aaKnown RBP8.2□□□□□ -1.1
TPM4-210ENST00000588507 WDR43Q15061 677 aaKnown RBP eCLIP8.2□□□□□ -1.11e-6■□□□□ 11.1
TPM4-210ENST00000588507 TTC39AQ5SRH9 613 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 PCSK4Q6UW60 755 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 PARM1Q6UWI2 310 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 SLC30A10Q6XR72 485 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 RSPH3Q86UC2 560 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 ZNF687Q8N1G0 1237 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 SPEM1Q8N4L4 309 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 STAG1Q8WVM7 1258 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 GAB3Q8WWW8 586 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 AUTS2Q8WXX7 1259 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 ARID3AQ99856 593 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.2□□□□□ -1.1
TPM4-210ENST00000588507 TUT1Q9H6E5 874 aaKnown RBP8.2□□□□□ -1.1
TPM4-210ENST00000588507 DCP1AQ9NPI6 582 aaPredicted RBP8.2□□□□□ -1.1
TPM4-210ENST00000588507 ZFP37Q9Y6Q3 630 aaPredicted RBP8.2□□□□□ -1.1
TPM4-210ENST00000588507 MYH15Q9Y2K3 1946 aa8.2□□□□□ -1.1
TPM4-210ENST00000588507 POLQO75417 2590 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 F5P12259 2224 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 NBPF19A0A087WUL8 3843 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 MAGEB6P1A0A0J9YX57 407 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 NFIBO00712 420 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 MAN2B1O00754 1011 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 RPP40O75818 363 aaKnown RBP8.19□□□□□ -1.1
TPM4-210ENST00000588507 PBX3P40426 434 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 ZAP70P43403 619 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 RARSP54136 660 aaKnown RBP8.19□□□□□ -1.1
TPM4-210ENST00000588507 SNAP25P60880 206 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 TMED8Q6PL24 325 aaPredicted RBP8.19□□□□□ -1.1
TPM4-210ENST00000588507 RNF207Q6ZRF8 634 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 C16orf86Q6ZW13 317 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 MTSS1LQ765P7 747 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 GET4Q7L5D6 327 aaPredicted RBP8.19□□□□□ -1.1
TPM4-210ENST00000588507 VPS52Q8N1B4 723 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 SLC39A11Q8N1S5 342 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 FCRL3Q96P31 734 aaPredicted RBP8.19□□□□□ -1.1
TPM4-210ENST00000588507 CDY2AQ9Y6F7 541 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 SQORQ9Y6N5 450 aa8.19□□□□□ -1.1
TPM4-210ENST00000588507 MYO5AQ9Y4I1 1855 aaKnown RBP8.19□□□□□ -1.1
TPM4-210ENST00000588507 KHNYNO15037 678 aaKnown RBP8.18□□□□□ -1.1
TPM4-210ENST00000588507 ICAM1P05362 532 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 CCDC192P0DO97 292 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 CTSAP10619 480 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 KLRC2P26717 231 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 HOXA6P31267 233 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 CLCN4P51793 760 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 ADAM17P78536 824 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 ARHGAP4P98171 946 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 TAF1BQ53T94 588 aaPredicted RBP8.18□□□□□ -1.1
TPM4-210ENST00000588507 CCDC158Q5M9N0 1113 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 SLFN13Q68D06 897 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 TAF2Q6P1X5 1199 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 KRT25Q7Z3Z0 450 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 GMCL1P1Q8NEA9 526 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 SDR42E1Q8WUS8 393 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 SMG7Q92540 1137 aaKnown RBP8.18□□□□□ -1.1
TPM4-210ENST00000588507 PHKBQ93100 1093 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 ZC3H10Q96K80 434 aaKnown RBP8.18□□□□□ -1.1
TPM4-210ENST00000588507 DCBLD2Q96PD2 775 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 ZBP1Q9H171 429 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 HEBP1Q9NRV9 189 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 PRR12Q9ULL5 1215 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 PADI3Q9ULW8 664 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 AHCTF1Q8WYP5 2266 aa8.18□□□□□ -1.1
TPM4-210ENST00000588507 RELNP78509 3460 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 LAMA4Q16363 1823 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 PLXNB3Q9ULL4 1909 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 ERVH48-1M5A8F1 160 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 INPPL1O15357 1258 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 CFBP00751 764 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 RPS6P62753 249 aaKnown RBP8.17□□□□□ -1.1
TPM4-210ENST00000588507 CREB5Q02930 508 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 HSDL1Q3SXM5 330 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 C12orf60Q5U649 245 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 ELMSAN1Q6PJG2 1045 aa8.17□□□□□ -1.1
TPM4-210ENST00000588507 ZNF574Q6ZN55 896 aaPredicted RBP8.17□□□□□ -1.1
TPM4-210ENST00000588507 LRRC55Q6ZSA7 311 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms