RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 MTRQ99707 1265 aa13.24□□□□□ -0.29
SDHDP1-201ENST00000588055 SH2D3AQ9BRG2 576 aa13.24□□□□□ -0.29
SDHDP1-201ENST00000588055 DDX19AQ9NUU7 478 aaKnown RBP13.24□□□□□ -0.29
SDHDP1-201ENST00000588055 KIAA1024Q9UPX6 916 aa13.24□□□□□ -0.29
SDHDP1-201ENST00000588055 DNM3Q9UQ16 869 aa13.24□□□□□ -0.29
SDHDP1-201ENST00000588055 GINS2Q9Y248 185 aa13.24□□□□□ -0.29
SDHDP1-201ENST00000588055 CDY2AQ9Y6F7 541 aa13.24□□□□□ -0.29
SDHDP1-201ENST00000588055 MORC2Q9Y6X9 1032 aaPredicted RBP13.24□□□□□ -0.29
SDHDP1-201ENST00000588055 PP2D1A8MPX8 630 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 MAFO75444 373 aaPredicted RBP13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 SPATA31C1P0DKV0 1188 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 RARRES1P49788 294 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 NPEPPSP55786 919 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 CDC42EP1Q00587 391 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 TMEM62Q0P6H9 643 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 PTPAQ15257 358 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 IL17AQ16552 155 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 ODR4Q5SWX8 454 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 USP38Q8NB14 1042 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 MCPH1Q8NEM0 835 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 NLRP7Q8WX94 980 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 PSPC1Q8WXF1 523 aaKnown RBP13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 APBB2Q92870 758 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 RNPC3Q96LT9 517 aaKnown RBP13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 DBR1Q9UK59 544 aaKnown RBP13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
SDHDP1-201ENST00000588055 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 ZBBXA8MT70 800 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 EFCAB14O75071 495 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 PPP6R2O75170 966 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 BAIAP3O94812 1187 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 STBD1O95210 358 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 FGBP02675 491 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 VTNP04004 478 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 ACRP10323 421 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 ME1P48163 572 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 DNM1Q05193 864 aaKnown RBP13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 PAK2Q13177 524 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 FAM26DQ5JW98 314 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 CNKSR3Q6P9H4 555 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 TSHZ1Q6ZSZ6 1077 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 KIAA0319LQ8IZA0 1049 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 LINC00301Q8NCQ3 95 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 SEPT8Q92599 483 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 PPP1R16BQ96T49 567 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 CELF4Q9BZC1 486 aaKnown RBP13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 CSRNP2Q9H175 543 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 DHX33Q9H6R0 707 aaKnown RBP13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 PCDH10Q9P2E7 1040 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 TFIP11Q9UBB9 837 aaKnown RBP13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 CIZ1Q9ULV3 898 aaPredicted RBP13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 EVPLQ92817 2033 aa13.22□□□□□ -0.29
SDHDP1-201ENST00000588055 SIP14410 1827 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 GHRP10912 638 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 CDC25AP30304 524 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 KCNJ6P48051 423 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 MGAT3Q09327 533 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 TFDP1Q14186 410 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 KIZQ2M2Z5 673 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 SYMPKQ92797 1274 aaKnown RBP13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 SPATA32Q96LK8 384 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 IFIH1Q9BYX4 1025 aaKnown RBP13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 SCAND2PQ9GZW5 306 aaPredicted RBP13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 BHMT2Q9H2M3 363 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 SUCLA2Q9P2R7 463 aaPredicted RBP13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 COLQQ9Y215 455 aaPredicted RBP13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 COL4A3BPQ9Y5P4 624 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 SQORQ9Y6N5 450 aa13.21□□□□□ -0.29
SDHDP1-201ENST00000588055 IGKV6-21A0A0C4DH24 114 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 ZBTB39O15060 712 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 CUTAO60888 179 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 NBNO60934 754 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 EYA4O95677 639 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 CHRNA1P02708 482 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 CXCL10P02778 98 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 CRYBB1P53674 252 aaPredicted RBP13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 NLRP11P59045 1033 aaKnown RBP13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 IKBKEQ14164 716 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 MXD4Q14582 209 aaPredicted RBP13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 FBXO47Q5MNV8 452 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 HYIQ5T013 277 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 TRAF7Q6Q0C0 670 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 ZNF365Q70YC5 407 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 OTOP2Q7RTS6 562 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 ZNF410Q86VK4 478 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 LINC01465Q8N7H1 131 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 NLRP4Q96MN2 994 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 OSMRQ99650 979 aa13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 MMTAG2Q9BU76 263 aaKnown RBP13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 GCOM2Q9BZD3 368 aaPredicted RBP13.2□□□□□ -0.3
SDHDP1-201ENST00000588055 E9PMD0 336 aa13.19□□□□□ -0.3
SDHDP1-201ENST00000588055 ASAP2O43150 1006 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms