RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SLC7A3Q8WY07 619 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 CEP170P1Q96L14 293 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 CEP89Q96ST8 783 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 SUGCTQ9HAC7 445 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 TUFT1Q9NNX1 390 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
TPM4-207ENST00000588032 ANKEF1Q9NU02 776 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 PCDHB6Q9Y5E3 794 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 MYH9P35579 1960 aaKnown RBP11.3□□□□□ -0.6
TPM4-207ENST00000588032 SCN5AQ14524 2016 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 GPR32O75388 356 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 BMP15O95972 392 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 CLCN3P51790 818 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 CYP4A11Q02928 519 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 TMEM62Q0P6H9 643 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
TPM4-207ENST00000588032 HAUS3Q68CZ6 603 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 POLR3CQ9BUI4 534 aaPredicted RBP11.3□□□□□ -0.6
TPM4-207ENST00000588032 SEMA6BQ9H3T3 888 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 ZNF576Q9H609 170 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 DHX33Q9H6R0 707 aaKnown RBP11.3□□□□□ -0.6
TPM4-207ENST00000588032 AGO3Q9H9G7 860 aaKnown RBP11.3□□□□□ -0.6
TPM4-207ENST00000588032 SLC28A3Q9HAS3 691 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 MTMR10Q9NXD2 777 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 WRAP73Q9P2S5 460 aaPredicted RBP11.3□□□□□ -0.6
TPM4-207ENST00000588032 AKT3Q9Y243 479 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 DNAH12Q6ZR08 3092 aa11.3□□□□□ -0.6
TPM4-207ENST00000588032 POTEMA6NI47 508 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 ENPP3O14638 875 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 ASAP2O43150 1006 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 TLL1O43897 1013 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 RPS6KA5O75582 802 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 GJB5O95377 273 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 VTNP04004 478 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 SPATA31C1P0DKV0 1188 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 SYT1P21579 422 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 EIF4BP23588 611 aaKnown RBP11.29□□□□□ -0.6
TPM4-207ENST00000588032 RPA1P27694 616 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 CD52P31358 61 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 PBX2P40425 430 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
TPM4-207ENST00000588032 NLRP11P59045 1033 aaKnown RBP11.29□□□□□ -0.6
TPM4-207ENST00000588032 PAK2Q13177 524 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 KIZQ2M2Z5 673 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 TCTN1Q2MV58 587 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 XKR9Q5GH70 373 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
TPM4-207ENST00000588032 DTHD1Q6ZMT9 781 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 CATSPER3Q86XQ3 398 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 LRRC71Q8N4P6 559 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 TCP11Q8WWU5 503 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 TOP1MTQ969P6 601 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 NACC1Q96RE7 527 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 RAD9AQ99638 391 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 OSBPL7Q9BZF2 842 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 INO80BQ9C086 356 aaPredicted RBP11.29□□□□□ -0.6
TPM4-207ENST00000588032 LRWD1Q9UFC0 647 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 PADI3Q9ULW8 664 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 INSL6Q9Y581 213 aa11.29□□□□□ -0.6
TPM4-207ENST00000588032 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 VPS37CA5D8V6 355 aaPredicted RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 TMEM150BA6NC51 233 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 DGAT1O75907 488 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 GPC3P51654 580 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 RABGGTBP53611 331 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 NPEPPSP55786 919 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 DEFB103AP81534 67 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 ATP2C1P98194 919 aaPredicted RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 NBR1Q14596 966 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 PLA2G4FQ68DD2 849 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.28□□□□□ -0.66e-8■□□□□ 8.4
TPM4-207ENST00000588032 Q7L0L9 218 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 ZNF410Q86VK4 478 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 MYOCDQ8IZQ8 938 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 KCTD17Q8N5Z5 321 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 IGSF22Q8N9C0 903 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 SH2D3AQ9BRG2 576 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 GCOM2Q9BZD3 368 aaPredicted RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 NKX2-4Q9H2Z4 354 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 TTYH1Q9H313 450 aaPredicted RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 ADAMTS10Q9H324 1103 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
TPM4-207ENST00000588032 SUCLA2Q9P2R7 463 aaPredicted RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 DBR1Q9UK59 544 aaKnown RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 YBX2Q9Y2T7 364 aaKnown RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 NOC2LQ9Y3T9 749 aaKnown RBP11.28□□□□□ -0.6
TPM4-207ENST00000588032 DARSP14868 501 aaKnown RBP11.27□□□□□ -0.61
TPM4-207ENST00000588032 RARRES1P49788 294 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 MXD4Q14582 209 aaPredicted RBP11.27□□□□□ -0.61
TPM4-207ENST00000588032 KRT79Q5XKE5 535 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
TPM4-207ENST00000588032 TMEM40Q8WWA1 233 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 NLRP7Q8WX94 980 aa11.27□□□□□ -0.61
TPM4-207ENST00000588032 PSPC1Q8WXF1 523 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms