RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 UPF3BQ9BZI7 483 aaKnown RBP7.29□□□□□ -1.24
SDF2-205ENST00000587629 TLE6Q9H808 572 aa7.29□□□□□ -1.24
SDF2-205ENST00000587629 ERVK-5Q9HDB9 667 aa7.29□□□□□ -1.24
SDF2-205ENST00000587629 CLEC1BQ9P126 229 aa7.29□□□□□ -1.24
SDF2-205ENST00000587629 BARX2Q9UMQ3 279 aaPredicted RBP7.29□□□□□ -1.24
SDF2-205ENST00000587629 SQORQ9Y6N5 450 aa7.29□□□□□ -1.24
SDF2-205ENST00000587629 RALGAPA2Q2PPJ7 1873 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 IGLV3-22A0A075B6J6 115 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 IGKV6D-21A0A0A0MT36 114 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 RPLP2P05387 115 aaKnown RBP7.28□□□□□ -1.24
SDF2-205ENST00000587629 CHRM1P11229 460 aaPredicted RBP7.28□□□□□ -1.24
SDF2-205ENST00000587629 SLC26A2P50443 739 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 METAP2P50579 478 aaKnown RBP eCLIP7.28□□□□□ -1.24
SDF2-205ENST00000587629 CLCN3P51790 818 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 AP3B2Q13367 1082 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 SMAD4Q13485 552 aaKnown RBP7.28□□□□□ -1.24
SDF2-205ENST00000587629 PFKFB3Q16875 520 aaPredicted RBP7.28□□□□□ -1.24
SDF2-205ENST00000587629 PRR16Q569H4 304 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 NAALADL2Q58DX5 795 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 BMP2KLQ5H9B9 411 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 ZNF484Q5JVG2 852 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 Q6ZUG5 572 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 HFE2Q6ZVN8 426 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 SLC24A5Q71RS6 500 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 THNSL1Q8IYQ7 743 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 EFHBQ8N7U6 833 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 RNF169Q8NCN4 708 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 RASGRP4Q8TDF6 673 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 BRF1Q92994 677 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 PHKBQ93100 1093 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 PPP2R3CQ969Q6 453 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 MSLNLQ96KJ4 702 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 APOL5Q9BWW9 433 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 RGS18Q9NS28 235 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 TYW1Q9NV66 732 aaKnown RBP7.28□□□□□ -1.24
SDF2-205ENST00000587629 GABBR1Q9UBS5 961 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 TCEAL9Q9UHQ7 104 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 ARIH1Q9Y4X5 557 aaPredicted RBP7.28□□□□□ -1.24
SDF2-205ENST00000587629 SAMM50Q9Y512 469 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 PCDHB12Q9Y5F1 795 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 TTC3P53804 2025 aa7.28□□□□□ -1.24
SDF2-205ENST00000587629 KDM3AQ9Y4C1 1321 aa7.27□□□□□ -1.24
SDF2-205ENST00000587629 C9IYK1 514 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 hCG_1984214I3L0E3 225 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 GPR182O15218 404 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 GPR32O75388 356 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 CDC45O75419 566 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 FGF18O76093 207 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 C22orf31O95567 290 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 GLP2RO95838 553 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 PSAPP07602 524 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 CYP3A4P08684 503 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 PBX3P40426 434 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 CRYBB1P53674 252 aaPredicted RBP7.27□□□□□ -1.25
SDF2-205ENST00000587629 ERVFC1P60507 584 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 KRT32Q14532 448 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 TSGA10IPQ3SY00 556 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 EFCAB12Q6NXP0 572 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 LLGL2Q6P1M3 1020 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 NIPA1Q7RTP0 329 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 FAM228AQ86W67 206 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 REXO1Q8N1G1 1221 aaKnown RBP7.27□□□□□ -1.25
SDF2-205ENST00000587629 LRRC71Q8N4P6 559 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 ZNF713Q8N859 430 aaPredicted RBP7.27□□□□□ -1.25
SDF2-205ENST00000587629 COLGALT1Q8NBJ5 622 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 VN1R2Q8NFZ6 395 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 BBXQ8WY36 941 aaPredicted RBP7.27□□□□□ -1.25
SDF2-205ENST00000587629 GJA10Q969M2 543 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 RPGRIP1Q96KN7 1286 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 FBXL18Q96ME1 805 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 JAKMIP1Q96N16 626 aaKnown RBP7.27□□□□□ -1.25
SDF2-205ENST00000587629 POP1Q99575 1024 aaKnown RBP7.27□□□□□ -1.25
SDF2-205ENST00000587629 GLT8D2Q9H1C3 349 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 ATP6V0A4Q9HBG4 840 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 C6orf50Q9HD87 102 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 TLR9Q9NR96 1032 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 AAASQ9NRG9 546 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 TBC1D22BQ9NU19 505 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 PCDHB8Q9UN66 801 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 AKT3Q9Y243 479 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 USP15Q9Y4E8 981 aaPredicted RBP7.27□□□□□ -1.25
SDF2-205ENST00000587629 PCDHA10Q9Y5I2 948 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 ATG2AQ2TAZ0 1938 aa7.27□□□□□ -1.25
SDF2-205ENST00000587629 COL1A2P08123 1366 aa7.26□□□□□ -1.25
SDF2-205ENST00000587629 CCDC196A0A1B0GTZ2 297 aa7.26□□□□□ -1.25
SDF2-205ENST00000587629 CHMP2AO43633 222 aa7.26□□□□□ -1.25
SDF2-205ENST00000587629 CSDE1O75534 798 aaKnown RBP7.26□□□□□ -1.25
SDF2-205ENST00000587629 EYA4O95677 639 aa7.26□□□□□ -1.25
SDF2-205ENST00000587629 HMGB1P09429 215 aaKnown RBP7.26□□□□□ -1.25
SDF2-205ENST00000587629 FGFR4P22455 802 aa7.26□□□□□ -1.25
SDF2-205ENST00000587629 SP100P23497 879 aaPredicted RBP7.26□□□□□ -1.25
SDF2-205ENST00000587629 NLRP11P59045 1033 aaKnown RBP7.26□□□□□ -1.25
SDF2-205ENST00000587629 CCT2P78371 535 aaKnown RBP7.26□□□□□ -1.25
SDF2-205ENST00000587629 AKAP17AQ02040 695 aaKnown RBP7.26□□□□□ -1.25
SDF2-205ENST00000587629 COASYQ13057 564 aa7.26□□□□□ -1.25
SDF2-205ENST00000587629 PKN1Q16512 942 aa7.26□□□□□ -1.25
SDF2-205ENST00000587629 LONRF3Q496Y0 759 aa7.26□□□□□ -1.25
SDF2-205ENST00000587629 HERC4Q5GLZ8 1057 aaPredicted RBP7.26□□□□□ -1.25
SDF2-205ENST00000587629 ODR4Q5SWX8 454 aa7.26□□□□□ -1.25
SDF2-205ENST00000587629 PLPP4Q5VZY2 271 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms