RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 A0A1W2PRG0 241 aa21.62■■□□□ 1.05
MBD1-216ENST00000587605 PGRMC1O00264 195 aaKnown RBP21.62■■□□□ 1.05
MBD1-216ENST00000587605 CASP4P49662 377 aa21.62■■□□□ 1.05
MBD1-216ENST00000587605 SCFD2Q8WU76 684 aa21.62■■□□□ 1.05
MBD1-216ENST00000587605 DYDC2Q96IM9 177 aa21.62■■□□□ 1.05
MBD1-216ENST00000587605 WDR18Q9BV38 432 aa21.62■■□□□ 1.05
MBD1-216ENST00000587605 STK33Q9BYT3 514 aa21.62■■□□□ 1.05
MBD1-216ENST00000587605 FAM107BQ9H098 131 aa21.62■■□□□ 1.05
MBD1-216ENST00000587605 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.62■■□□□ 1.05
MBD1-216ENST00000587605 FRMD4BQ9Y2L6 1034 aa21.62■■□□□ 1.05
MBD1-216ENST00000587605 PCDHB13Q9Y5F0 798 aa21.62■■□□□ 1.05
MBD1-216ENST00000587605 RBBP6Q7Z6E9 1792 aaKnown RBP21.61■■□□□ 1.05
MBD1-216ENST00000587605 GAS7O60861 476 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 CARSP49589 748 aaKnown RBP21.61■■□□□ 1.05
MBD1-216ENST00000587605 IRX5P78411 483 aaPredicted RBP21.61■■□□□ 1.05
MBD1-216ENST00000587605 CTTNQ14247 550 aaKnown RBP21.61■■□□□ 1.05
MBD1-216ENST00000587605 FAM160B2Q86V87 743 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 TPH2Q8IWU9 490 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 IQCKQ8N0W5 287 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 VTI1AQ96AJ9 217 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 ZBTB9Q96C00 473 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 CAPS2Q9BXY5 557 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 NFU1Q9UMS0 254 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 NCANO14594 1321 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 CLIC2O15247 247 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 VIL1P09327 827 aaKnown RBP21.61■■□□□ 1.05
MBD1-216ENST00000587605 SOX5P35711 763 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 JAG1P78504 1218 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 SLC20A2Q08357 652 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 CEP55Q53EZ4 464 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 CASKIN2Q8WXE0 1202 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.61■■□□□ 1.057e-7■■□□□ 13.3
MBD1-216ENST00000587605 ISCUQ9H1K1 167 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 TAF1DQ9H5J8 278 aaPredicted RBP21.61■■□□□ 1.05
MBD1-216ENST00000587605 DMAC2Q9NW81 257 aa21.61■■□□□ 1.05
MBD1-216ENST00000587605 DIS3Q9Y2L1 958 aaKnown RBP21.61■■□□□ 1.05
MBD1-216ENST00000587605 MYO1CO00159 1063 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 CFBP00751 764 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 GUCY2CP25092 1073 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 FMO5P49326 533 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 ZNF720Q7Z2F6 126 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 PEX26Q7Z412 305 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 SLC9A9Q8IVB4 645 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 RASGEF1CQ8N431 466 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 PIGOQ8TEQ8 1089 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 IFT81Q8WYA0 676 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 ZIM3Q96PE6 472 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 PACSIN2Q9UNF0 486 aaPredicted RBP21.6■■□□□ 1.05
MBD1-216ENST00000587605 PSME4Q14997 1843 aa21.6■■□□□ 1.05
MBD1-216ENST00000587605 RAD51CO43502 376 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 DNA2P51530 1060 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 IRAK1P51617 712 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 MRPS25P82663 173 aaKnown RBP21.59■■□□□ 1.05
MBD1-216ENST00000587605 ALCAMQ13740 583 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 FAM178BQ8IXR5 827 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 CCDC43Q96MW1 224 aaKnown RBP21.59■■□□□ 1.05
MBD1-216ENST00000587605 HINFPQ9BQA5 517 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 TEKT3Q9BXF9 490 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 STXBP5LQ9Y2K9 1186 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 DDX3XO00571 662 aaKnown RBP eCLIP21.59■■□□□ 1.052e-8■■■■□ 25.7
MBD1-216ENST00000587605 CEP104O60308 925 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 NMT1P30419 496 aaKnown RBP21.59■■□□□ 1.05
MBD1-216ENST00000587605 HSPA9P38646 679 aaKnown RBP21.59■■□□□ 1.05
MBD1-216ENST00000587605 RRP1BQ14684 758 aaKnown RBP21.59■■□□□ 1.05
MBD1-216ENST00000587605 CLUL1Q15846 466 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 DNAJC21Q5F1R6 531 aaKnown RBP21.59■■□□□ 1.05
MBD1-216ENST00000587605 EMC10Q5UCC4 262 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 SLC30A5Q8TAD4 765 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 RIT2Q99578 217 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 DEFB129Q9H1M3 183 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 SLITRK6Q9H5Y7 841 aa21.59■■□□□ 1.05
MBD1-216ENST00000587605 BHMG1C9JSJ3 638 aaPredicted RBP21.58■■□□□ 1.04
MBD1-216ENST00000587605 F8VZ95 297 aa21.58■■□□□ 1.04
MBD1-216ENST00000587605 TMEM253P0C7T8 217 aa21.58■■□□□ 1.04
MBD1-216ENST00000587605 AOC3Q16853 763 aa21.58■■□□□ 1.04
MBD1-216ENST00000587605 LRIG3Q6UXM1 1119 aa21.58■■□□□ 1.04
MBD1-216ENST00000587605 SPICE1Q8N0Z3 855 aa21.58■■□□□ 1.04
MBD1-216ENST00000587605 U2AF1L4Q8WU68 220 aaKnown RBP21.58■■□□□ 1.04
MBD1-216ENST00000587605 TMEM174Q8WUU8 243 aa21.58■■□□□ 1.04
MBD1-216ENST00000587605 PRMT6Q96LA8 375 aaPredicted RBP21.58■■□□□ 1.04
MBD1-216ENST00000587605 FIZ1Q96SL8 496 aa21.58■■□□□ 1.04
MBD1-216ENST00000587605 AGPAT3Q9NRZ7 376 aa21.58■■□□□ 1.04
MBD1-216ENST00000587605 FEZ2Q9UHY8 353 aaPredicted RBP21.58■■□□□ 1.04
MBD1-216ENST00000587605 TTC7AQ9ULT0 858 aaPredicted RBP21.58■■□□□ 1.04
MBD1-216ENST00000587605 EIF3HO15372 352 aaKnown RBP eCLIP21.57■■□□□ 1.045e-7■■□□□ 12.6
MBD1-216ENST00000587605 EVI5O60447 810 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 ZBTB48P10074 688 aaPredicted RBP21.57■■□□□ 1.04
MBD1-216ENST00000587605 MAPTP10636 758 aaKnown RBP21.57■■□□□ 1.04
MBD1-216ENST00000587605 KCNA1Q09470 495 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 PPP2R5EQ16537 467 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 GRIPAP1Q4V328 841 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 TTMPQ5BVD1 217 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 FAM151AQ8WW52 585 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 LRRC45Q96CN5 670 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 ZNF577Q9BSK1 485 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 RASSF4Q9H2L5 321 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 RSPH14Q9UHP6 348 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 AJAP1Q9UKB5 411 aaPredicted RBP21.57■■□□□ 1.04
MBD1-216ENST00000587605 B3GNT9Q6UX72 402 aa21.57■■□□□ 1.04
MBD1-216ENST00000587605 METTL13Q8N6R0 699 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms