RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 HSD17B3P37058 310 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 LIG3P49916 1009 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 SLC15A2Q16348 729 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 CERKLQ49MI3 558 aaPredicted RBP18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 TATDN1Q6P1N9 297 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 AEBP2Q6ZN18 517 aaPredicted RBP18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 H2AFVQ71UI9 128 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 PEX26Q7Z412 305 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 BHMT2Q9H2M3 363 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 SUCLA2Q9P2R7 463 aaPredicted RBP18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 NOC2LQ9Y3T9 749 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 ATXN2Q99700 1313 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 TMCO5BA8MYB1 307 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 CCDC188H7C350 402 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 FOSP01100 380 aaPredicted RBP18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 SREBF1P36956 1147 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 PTPROQ16827 1216 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 SIAH1Q8IUQ4 282 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 TMBIM4Q9HC24 238 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 POLD4Q9HCU8 107 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 STXBP5LQ9Y2K9 1186 aa18.38■□□□□ 0.53
PRKCSH-205ENST00000587327 GOLGA6L10A6NI86 522 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 SPDYE3A6NKU9 549 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 YDJCA8MPS7 323 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 H0YGN5 161 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 KRIT1O00522 736 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 DDX3XO00571 662 aaKnown RBP eCLIP18.37■□□□□ 0.533e-24■■■■□ 24.1
PRKCSH-205ENST00000587327 MSH4O15457 936 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 GCNT3O95395 438 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 MDH1P40925 334 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 NPEPPSP55786 919 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 CYP4A11Q02928 519 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 KCNA1Q09470 495 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 SPATS2Q86XZ4 545 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 SYCE1Q8N0S2 351 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 RASGEF1CQ8N431 466 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 LRRC45Q96CN5 670 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 BORCS6Q96GS4 357 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 RUSC1Q9BVN2 902 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 DDX47Q9H0S4 455 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 VAV3Q9UKW4 847 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 NFS1Q9Y697 457 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 ATRNL1Q5VV63 1379 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 TBCAO75347 108 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 INPP5BP32019 993 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 CIITAP33076 1130 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 PTGISQ16647 500 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 GJB7Q6PEY0 223 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 DDX42Q86XP3 938 aaKnown RBP eCLIP18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 POLR3CQ9BUI4 534 aaPredicted RBP18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 BCAS3Q9H6U6 928 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 OLFML3Q9NRN5 406 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 PCDHB13Q9Y5F0 798 aa18.37■□□□□ 0.53
PRKCSH-205ENST00000587327 PSME4Q14997 1843 aa18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 GCOM1H8Y6P7 765 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 CLIC2O15247 247 aa18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 EYA4O95677 639 aa18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 MYZAPP0CAP1 466 aa18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 FERP16591 822 aa18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 SNAP25P60880 206 aa18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 UAP1Q16222 522 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 DAAM2Q86T65 1068 aa18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 NT5DC3Q86UY8 548 aa18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 TDRD3Q9H7E2 651 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-205ENST00000587327 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 GDF11O95390 407 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 ICA1Q05084 483 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 USH1GQ495M9 461 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 NAA35Q5VZE5 725 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 FBXO11Q86XK2 927 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 HES6Q96HZ4 224 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 EIF2AK1Q9BQI3 630 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 PAGR1Q9BTK6 254 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 SLITRK6Q9H5Y7 841 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 RABGAP1Q9Y3P9 1069 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 SRRM3A6NNA2 597 aaPredicted RBP18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 F5H6K3 240 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 GFPT2O94808 682 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 ITGA4P13612 1032 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 STAT1P42224 750 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 MMP14P50281 582 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 KLRC3Q07444 240 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 ICE2Q659A1 982 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 TMEM179Q6ZVK1 233 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 KCTD17Q8N5Z5 321 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 PROCA1Q8NCQ7 364 aaPredicted RBP18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 SLC30A5Q8TAD4 765 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 CYP2W1Q8TAV3 490 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 NEUROG2Q9H2A3 272 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 AMACRQ9UHK6 382 aa18.35■□□□□ 0.53
PRKCSH-205ENST00000587327 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-205ENST00000587327 GAP43P17677 238 aa18.34■□□□□ 0.53
PRKCSH-205ENST00000587327 CTNNA1P35221 906 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-205ENST00000587327 GALCP54803 685 aa18.34■□□□□ 0.53
PRKCSH-205ENST00000587327 JAG1P78504 1218 aa18.34■□□□□ 0.53
PRKCSH-205ENST00000587327 RINT1Q6NUQ1 792 aa18.34■□□□□ 0.53
PRKCSH-205ENST00000587327 ARFGAP2Q8N6H7 521 aa18.34■□□□□ 0.53
PRKCSH-205ENST00000587327 KAT2BQ92831 832 aa18.34■□□□□ 0.53
PRKCSH-205ENST00000587327 CAMKK2Q96RR4 588 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms