RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 KCNQ1P51787 676 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 SCRN1Q12765 414 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 KIZQ2M2Z5 673 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 PPP4R3AQ6IN85 833 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 EFCAB12Q6NXP0 572 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 TRMT1LQ7Z2T5 733 aaKnown RBP12.66□□□□□ -0.38
ACTN4-209ENST00000586538 OSMRQ99650 979 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 PHF20Q9BVI0 1012 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 INO80BQ9C086 356 aaPredicted RBP12.66□□□□□ -0.38
ACTN4-209ENST00000586538 ERVK-5Q9HDB9 667 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 RGS18Q9NS28 235 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 ST3GAL5Q9UNP4 418 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 PCDHB12Q9Y5F1 795 aa12.66□□□□□ -0.38
ACTN4-209ENST00000586538 LOXHD1Q8IVV2 1947 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.65□□□□□ -0.38
ACTN4-209ENST00000586538 ZBTB42B2RXF5 422 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 M0R2N6 131 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 BAG4O95429 457 aaKnown RBP12.65□□□□□ -0.38
ACTN4-209ENST00000586538 ATP4AP20648 1035 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 KCNA5P22460 613 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 EIF4BP23588 611 aaKnown RBP12.65□□□□□ -0.38
ACTN4-209ENST00000586538 PSMC5P62195 406 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 UBE3AQ05086 875 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 TRIM29Q14134 588 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 TMEM266Q2M3C6 531 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 LETM2Q2VYF4 491 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
ACTN4-209ENST00000586538 SLFN12Q8IYM2 578 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 ABI1Q8IZP0 508 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 LINC01599Q8WXQ3 324 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 ZBTB10Q96DT7 871 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 MBOAT7Q96N66 472 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 ADAM2Q99965 735 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 UNC45AQ9H3U1 944 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 ATP6V0A4Q9HBG4 840 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 TMEM161AQ9NX61 479 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 DACT1Q9NYF0 836 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
ACTN4-209ENST00000586538 NOC2LQ9Y3T9 749 aaKnown RBP12.65□□□□□ -0.38
ACTN4-209ENST00000586538 XIRP2A4UGR9 3374 aa12.65□□□□□ -0.38
ACTN4-209ENST00000586538 GPR32O75388 356 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 TDP2O95551 362 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 VTNP04004 478 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 LAG3P18627 525 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 SFPQP23246 707 aaKnown RBP eCLIP12.64□□□□□ -0.39
ACTN4-209ENST00000586538 KRT2P35908 639 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 CLCN3P51790 818 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 NLRP11P59045 1033 aaKnown RBP12.64□□□□□ -0.39
ACTN4-209ENST00000586538 INF2Q27J81 1249 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 TCEAL5Q5H9L2 206 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 ZNF410Q86VK4 478 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 CRIPAKQ8N1N5 446 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 ETNPPLQ8TBG4 499 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 NLRP7Q8WX94 980 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 UIMC1Q96RL1 719 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 NIFKQ9BYG3 293 aaKnown RBP12.64□□□□□ -0.39
ACTN4-209ENST00000586538 GCOM2Q9BZD3 368 aaPredicted RBP12.64□□□□□ -0.39
ACTN4-209ENST00000586538 ORC3Q9UBD5 711 aaPredicted RBP12.64□□□□□ -0.39
ACTN4-209ENST00000586538 TPCN1Q9ULQ1 816 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 EVPLQ92817 2033 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 MUC3AQ02505 3323 aa12.64□□□□□ -0.39
ACTN4-209ENST00000586538 TBKBP1A7MCY6 615 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 C9IYK1 514 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 GAS2O43903 313 aaKnown RBP12.63□□□□□ -0.39
ACTN4-209ENST00000586538 CCNT1O60563 726 aaKnown RBP12.63□□□□□ -0.39
ACTN4-209ENST00000586538 P4HBP07237 508 aaKnown RBP12.63□□□□□ -0.39
ACTN4-209ENST00000586538 SRGAP2BP0DMP2 458 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 SKIP12755 728 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 PPM1AP35813 382 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 QARSP47897 775 aaKnown RBP12.63□□□□□ -0.39
ACTN4-209ENST00000586538 AK2P54819 239 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 PPP2R5CQ13362 524 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 PTCRAQ6ISU1 281 aaPredicted RBP12.63□□□□□ -0.39
ACTN4-209ENST00000586538 PDE12Q6L8Q7 609 aaKnown RBP12.63□□□□□ -0.39
ACTN4-209ENST00000586538 EP400NLQ6ZTU2 488 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 PIK3AP1Q6ZUJ8 805 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 OTUD6AQ7L8S5 288 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 RTN4RL1Q86UN2 441 aaPredicted RBP12.63□□□□□ -0.39
ACTN4-209ENST00000586538 FAM228AQ86W67 206 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 LRRC43Q8N309 656 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 NEK9Q8TD19 979 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 TMEM40Q8WWA1 233 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 SLC7A3Q8WY07 619 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
ACTN4-209ENST00000586538 TMEM117Q9H0C3 514 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 TMX1Q9H3N1 280 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 CHST12Q9NRB3 414 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 CLDND1Q9NY35 253 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 PRKAG3Q9UGI9 489 aa12.63□□□□□ -0.39
ACTN4-209ENST00000586538 MRPL42Q9Y6G3 142 aaKnown RBP12.63□□□□□ -0.39
ACTN4-209ENST00000586538 WDR81Q562E7 1941 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 ADAMTS3O15072 1205 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 ZNF862O60290 1169 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 EOMESO95936 686 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 LINC00271P0C7V0 271 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 GPC3P51654 580 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 BMS1Q14692 1282 aaKnown RBP12.62□□□□□ -0.39
ACTN4-209ENST00000586538 MTERF2Q49AM1 385 aa12.62□□□□□ -0.39
ACTN4-209ENST00000586538 PAN2Q504Q3 1202 aaKnown RBP12.62□□□□□ -0.39
ACTN4-209ENST00000586538 B3GNT9Q6UX72 402 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms