RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 GAP43P17677 238 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 GUCY2CP25092 1073 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 ZNF131P52739 623 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 PSMC5P62195 406 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 ARHGEF6Q15052 776 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 TRPV1Q8NER1 839 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 CNOT6LQ96LI5 555 aaKnown RBP22.59■■□□□ 1.21
ATG4D-204ENST00000586417 KCTD10Q9H3F6 313 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 POLD4Q9HCU8 107 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 OLFML3Q9NRN5 406 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 PCDHA10Q9Y5I2 948 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 WDR81Q562E7 1941 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 BRCA2P51587 3418 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 RARRES1P49788 294 aa22.58■■□□□ 1.21
ATG4D-204ENST00000586417 LBX1P52954 281 aa22.58■■□□□ 1.21
ATG4D-204ENST00000586417 FAM114A1Q8IWE2 563 aa22.58■■□□□ 1.21
ATG4D-204ENST00000586417 SMAP1Q8IYB5 467 aaPredicted RBP22.58■■□□□ 1.21
ATG4D-204ENST00000586417 JPH1Q9HDC5 661 aaPredicted RBP22.58■■□□□ 1.21
ATG4D-204ENST00000586417 MAGEC2Q9UBF1 373 aaPredicted RBP22.58■■□□□ 1.21
ATG4D-204ENST00000586417 ODF2LQ9ULJ1 636 aa22.58■■□□□ 1.21
ATG4D-204ENST00000586417 SFPQP23246 707 aaKnown RBP eCLIP22.58■■□□□ 1.2
ATG4D-204ENST00000586417 SP4Q02446 784 aa22.58■■□□□ 1.2
ATG4D-204ENST00000586417 TTLL4Q14679 1199 aa22.58■■□□□ 1.2
ATG4D-204ENST00000586417 MFSD14CQ5VZR4 134 aa22.58■■□□□ 1.2
ATG4D-204ENST00000586417 C17orf53Q8N3J3 647 aaPredicted RBP22.58■■□□□ 1.2
ATG4D-204ENST00000586417 TSG101Q99816 390 aa22.58■■□□□ 1.2
ATG4D-204ENST00000586417 SLC9A2Q9UBY0 812 aa22.58■■□□□ 1.2
ATG4D-204ENST00000586417 PTCH2Q9Y6C5 1203 aa22.58■■□□□ 1.2
ATG4D-204ENST00000586417 LGALS16A8MUM7 142 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 FAM13AO94988 1023 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 KIF20AO95235 890 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 GGPS1O95749 300 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 MYBP10242 640 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 SMPD1P17405 629 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 YWHABP31946 246 aaKnown RBP22.57■■□□□ 1.2
ATG4D-204ENST00000586417 HOXD13P35453 343 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 CACNB2Q08289 660 aaPredicted RBP22.57■■□□□ 1.2
ATG4D-204ENST00000586417 MAPK7Q13164 816 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 BMT2Q1RMZ1 405 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 KCNV1Q6PIU1 500 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 PADI6Q6TGC4 694 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 CREBRFQ8IUR6 639 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 NELFCDQ8IXH7 590 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 LENG1Q96BZ8 264 aaPredicted RBP22.57■■□□□ 1.2
ATG4D-204ENST00000586417 FIZ1Q96SL8 496 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 ITIH6Q6UXX5 1313 aa22.57■■□□□ 1.2
ATG4D-204ENST00000586417 SFI1A8K8P3 1242 aa22.56■■□□□ 1.2
ATG4D-204ENST00000586417 NKRFO15226 690 aaKnown RBP eCLIP22.56■■□□□ 1.2
ATG4D-204ENST00000586417 FARP2O94887 1054 aaPredicted RBP22.56■■□□□ 1.2
ATG4D-204ENST00000586417 DAW1Q8N136 415 aa22.56■■□□□ 1.2
ATG4D-204ENST00000586417 ZNF507Q8TCN5 953 aa22.56■■□□□ 1.2
ATG4D-204ENST00000586417 PARVGQ9HBI0 331 aa22.56■■□□□ 1.2
ATG4D-204ENST00000586417 SKILP12757 684 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 CYBAP13498 195 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 ACTR2P61160 394 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 CELF3Q5SZQ8 465 aaKnown RBP22.55■■□□□ 1.2
ATG4D-204ENST00000586417 ABHD15Q6UXT9 468 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 ZC3H3Q8IXZ2 948 aaKnown RBP22.55■■□□□ 1.2
ATG4D-204ENST00000586417 TUBGCP2Q9BSJ2 902 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 MRPL44Q9H9J2 332 aaKnown RBP22.55■■□□□ 1.2
ATG4D-204ENST00000586417 SEL1LQ9UBV2 794 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 TMEM150BA6NC51 233 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 ZNF862O60290 1169 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 FGFR1OPO95684 399 aaKnown RBP22.55■■□□□ 1.2
ATG4D-204ENST00000586417 PRMT2P55345 433 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 GOLGA8FQ08AF8 430 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 GOLGA8DPQ0D2H9 430 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 NEDD9Q14511 834 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 IQSEC1Q6DN90 963 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 MYCT1Q8N699 235 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 PXYLP1Q8TE99 480 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 ANKEF1Q9NU02 776 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 SPTLC3Q9NUV7 552 aa22.55■■□□□ 1.2
ATG4D-204ENST00000586417 BACH1O14867 736 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 HIP1RO75146 1068 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 STBD1O95210 358 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 PSAPP07602 524 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 PRKAR2AP13861 404 aaKnown RBP22.54■■□□□ 1.2
ATG4D-204ENST00000586417 FKBP3Q00688 224 aaKnown RBP22.54■■□□□ 1.2
ATG4D-204ENST00000586417 TNFAIP2Q03169 654 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 KNOP1Q1ED39 458 aaKnown RBP22.54■■□□□ 1.2
ATG4D-204ENST00000586417 DUSP28Q4G0W2 176 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 MIIPQ5JXC2 388 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 CEP135Q66GS9 1140 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 TC2NQ8N9U0 490 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 TMX1Q9H3N1 280 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 MLXIPQ9HAP2 919 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 GABBR1Q9UBS5 961 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 PTPN22Q9Y2R2 807 aa22.54■■□□□ 1.2
ATG4D-204ENST00000586417 PRPF6O94906 941 aaKnown RBP22.53■■□□□ 1.2
ATG4D-204ENST00000586417 HMGCRP04035 888 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 CCND3P30281 292 aaPredicted RBP22.53■■□□□ 1.2
ATG4D-204ENST00000586417 ARHGAP1Q07960 439 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 EDRF1Q3B7T1 1238 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 HSDL1Q3SXM5 330 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 METTL7BQ6UX53 244 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 PPP4R3CPQ6ZMV5 832 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 ANO5Q75V66 913 aa22.53■■□□□ 1.2
ATG4D-204ENST00000586417 CCDC60Q8IWA6 550 aaPredicted RBP22.53■■□□□ 1.2
ATG4D-204ENST00000586417 DHX37Q8IY37 1157 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms