RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 PADI6Q6TGC4 694 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 ANKRD33Q7Z3H0 272 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 FAM126BQ8IXS8 530 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 METTL13Q8N6R0 699 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 LRRC15Q8TF66 581 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 TOX2Q96NM4 488 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 CEP89Q96ST8 783 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 MTRQ99707 1265 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 HTATIP2Q9BUP3 242 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 LRRC27Q9C0I9 530 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 TRPV6Q9H1D0 765 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 DHX33Q9H6R0 707 aaKnown RBP15.15■□□□□ 0.02
VMP1-203ENST00000586245 SUGCTQ9HAC7 445 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 ATP6V0A4Q9HBG4 840 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 BMP2KQ9NSY1 1161 aaPredicted RBP15.15■□□□□ 0.02
VMP1-203ENST00000586245 LMBRD1Q9NUN5 540 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 TRMT13Q9NUP7 481 aaKnown RBP15.15■□□□□ 0.02
VMP1-203ENST00000586245 SERTAD1Q9UHV2 236 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 PCDHA2Q9Y5H9 948 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 SMIM35A0A1B0GVV1 85 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 ZNF202O95125 648 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 RPLP2P05387 115 aaKnown RBP15.14■□□□□ 0.01
VMP1-203ENST00000586245 SLFN14P0C7P3 912 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 CYP11B2P19099 503 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 AMPD3Q01432 767 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 TLE2Q04725 743 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 PTK7Q13308 1070 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 RINT1Q6NUQ1 792 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 TAF2Q6P1X5 1199 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 RSPH3Q86UC2 560 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 GPBP1Q86WP2 473 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 FMR1NBQ8N0W7 255 aaPredicted RBP15.14■□□□□ 0.01
VMP1-203ENST00000586245 CNNM3Q8NE01 707 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 MCPH1Q8NEM0 835 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 TCP11Q8WWU5 503 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 ZBTB10Q96DT7 871 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 TNMDQ9H2S6 317 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 KCND2Q9NZV8 630 aa15.14■□□□□ 0.01
VMP1-203ENST00000586245 LOXHD1Q8IVV2 1947 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 IGKV6-21A0A0C4DH24 114 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 CD4P01730 458 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 KRT18P05783 430 aaKnown RBP15.13■□□□□ 0.01
VMP1-203ENST00000586245 LIG1P18858 919 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 LONRF3Q496Y0 759 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 C1orf186Q6ZWK4 172 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 SERINC5Q86VE9 423 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 LRRC71Q8N4P6 559 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 CCDC155Q8N6L0 562 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 MAP7D2Q96T17 732 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 TIPINQ9BVW5 301 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 FAM49AQ9H0Q0 323 aaPredicted RBP15.13■□□□□ 0.01
VMP1-203ENST00000586245 AKT3Q9Y243 479 aa15.13■□□□□ 0.01
VMP1-203ENST00000586245 KAT6AQ92794 2004 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 ACTN4O43707 911 aaKnown RBP15.12■□□□□ 0.01
VMP1-203ENST00000586245 KINO60870 393 aaKnown RBP15.12■□□□□ 0.01
VMP1-203ENST00000586245 NR1I2O75469 434 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 PTMSP20962 102 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 GUCY2CP25092 1073 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 CLCN3P51790 818 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 FAM102BQ5T8I3 360 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 IER5Q5VY09 327 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 KANK3Q6NY19 840 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 RUFY4Q6ZNE9 571 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 KRBA2Q6ZNG9 492 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 MAEAQ7L5Y9 396 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 ENGASEQ8NFI3 743 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 DNAJB3Q8WWF6 145 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 TMEM143Q96AN5 459 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 RUSC1Q9BVN2 902 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 PDLIM7Q9NR12 457 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 KBTBD4Q9NVX7 518 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 SUCLA2Q9P2R7 463 aaPredicted RBP15.12■□□□□ 0.01
VMP1-203ENST00000586245 ARID2Q68CP9 1835 aa15.12■□□□□ 0.01
VMP1-203ENST00000586245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
VMP1-203ENST00000586245 MYMKA6NI61 221 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 CLTBP09497 229 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 AFMP43652 599 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 RAD51AP2Q09MP3 1159 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 FAAP100Q0VG06 881 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 BFSP2Q13515 415 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 SNW1Q13573 536 aaKnown RBP15.11■□□□□ 0.01
VMP1-203ENST00000586245 ARSHQ5FYA8 562 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 NME8Q8N427 588 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 LINC01465Q8N7H1 131 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 CAGE1Q8TC20 777 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 PSPC1Q8WXF1 523 aaKnown RBP15.11■□□□□ 0.01
VMP1-203ENST00000586245 DDX12PQ92771 950 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 STAMQ92783 540 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 KIFAP3Q92845 792 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 DRC1Q96MC2 740 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 TIGD1Q96MW7 591 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 CTAGE1Q96RT6 745 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 POLR3FQ9H1D9 316 aaPredicted RBP15.11■□□□□ 0.01
VMP1-203ENST00000586245 XPNPEP1Q9NQW7 623 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 TMEM39AQ9NV64 488 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 DACT1Q9NYF0 836 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 HOOK1Q9UJC3 728 aaKnown RBP15.11■□□□□ 0.01
VMP1-203ENST00000586245 ODF2LQ9ULJ1 636 aa15.11■□□□□ 0.01
VMP1-203ENST00000586245 NPHP3-ACAD11A0A0J9YXS1 232 aa15.1■□□□□ 0.01
VMP1-203ENST00000586245 M0QZ92 97 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms