RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 UGCGQ16739 394 aa15.58■□□□□ 0.08
LIG3-205ENST00000585941 ARHGAP29Q52LW3 1261 aa15.58■□□□□ 0.08
LIG3-205ENST00000585941 CACNA2D4Q7Z3S7 1137 aa15.58■□□□□ 0.08
LIG3-205ENST00000585941 SYN2Q92777 582 aaPredicted RBP15.58■□□□□ 0.08
LIG3-205ENST00000585941 HVCN1Q96D96 273 aa15.58■□□□□ 0.08
LIG3-205ENST00000585941 MYO1AQ9UBC5 1043 aa15.58■□□□□ 0.08
LIG3-205ENST00000585941 DNAI1Q9UI46 699 aa15.58■□□□□ 0.08
LIG3-205ENST00000585941 KCNG1Q9UIX4 513 aa15.58■□□□□ 0.08
LIG3-205ENST00000585941 ARID2Q68CP9 1835 aa15.58■□□□□ 0.08
LIG3-205ENST00000585941 LOC102724159A0A0B4J2E5 919 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 K7ENM7 598 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 CTIFO43310 598 aaKnown RBP15.57■□□□□ 0.08
LIG3-205ENST00000585941 ABCD1P33897 745 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 ACTR2P61160 394 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 GNG11P61952 73 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 PWP2Q15269 919 aaKnown RBP15.57■□□□□ 0.08
LIG3-205ENST00000585941 ZC2HC1CQ53FD0 456 aaPredicted RBP15.57■□□□□ 0.08
LIG3-205ENST00000585941 ZNF662Q6ZS27 426 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 MOB2Q70IA6 237 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 SYCP3Q8IZU3 236 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 KIFAP3Q92845 792 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 ACCSQ96QU6 501 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 CHP1Q99653 195 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 L2HGDHQ9H9P8 463 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 DMAC2Q9NW81 257 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 GABBR1Q9UBS5 961 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 PNMA3Q9UL41 463 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 FRMD4BQ9Y2L6 1034 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 GTPBP10A4D1E9 387 aaKnown RBP15.57■□□□□ 0.08
LIG3-205ENST00000585941 EIF3CLB5ME19 914 aaKnown RBP15.57■□□□□ 0.08
LIG3-205ENST00000585941 BACH1O14867 736 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 AKAP3O75969 853 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 TGFB3P10600 412 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 CASQ1P31415 396 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 SMTNP53814 917 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 KCNMA1Q12791 1236 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 MOGSQ13724 837 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 ABHD15Q6UXT9 468 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 C12orf56Q8IXR9 622 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 FAM133AQ8N9E0 248 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 MCPH1Q8NEM0 835 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 SMCR8Q8TEV9 937 aaPredicted RBP15.57■□□□□ 0.08
LIG3-205ENST00000585941 SLC10A4Q96EP9 437 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 EIF3CQ99613 913 aaKnown RBP15.57■□□□□ 0.08
LIG3-205ENST00000585941 PAGR1Q9BTK6 254 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 MROH8Q9H579 483 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 POLD4Q9HCU8 107 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 AGPAT3Q9NRZ7 376 aa15.57■□□□□ 0.08
LIG3-205ENST00000585941 DOCK5Q9H7D0 1870 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 CNMDO75829 334 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 SUPT20HL2P0C7V6 817 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 SCP2P22307 547 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 GTF2BQ00403 316 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 CNTN2Q02246 1040 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 KCNA1Q09470 495 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 PPP2R5AQ15172 486 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 UTP14CQ5TAP6 766 aaKnown RBP15.56■□□□□ 0.08
LIG3-205ENST00000585941 KCNV1Q6PIU1 500 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 ANO5Q75V66 913 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 FAM186BQ8IYM0 893 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 SHCBP1Q8NEM2 672 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 NHEJ1Q9H9Q4 299 aaPredicted RBP15.56■□□□□ 0.08
LIG3-205ENST00000585941 PLCB1Q9NQ66 1216 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 EXOC7Q9UPT5 735 aa15.56■□□□□ 0.08
LIG3-205ENST00000585941 CLIC2O15247 247 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 DGAT1O75907 488 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 ATG7O95352 703 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 ERCC3P19447 782 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 NCKAP1LP55160 1127 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 RTP1P59025 263 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 FKBP1BP68106 108 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 NEDD9Q14511 834 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 XKR3Q5GH77 459 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 SWSAP1Q6NVH7 229 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 PDXDC1Q6P996 788 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 RRAGAQ7L523 313 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 TXLNBQ8N3L3 684 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 SPIRE2Q8WWL2 714 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 BAP1Q92560 729 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 BORCS6Q96GS4 357 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 CEP170P1Q96L14 293 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 CCDC42Q96M95 316 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 LSM14BQ9BX40 385 aaKnown RBP15.55■□□□□ 0.08
LIG3-205ENST00000585941 HAUS4Q9H6D7 363 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 BCAS3Q9H6U6 928 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 LZTFL1Q9NQ48 299 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 DAAM1Q9Y4D1 1078 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 IGSF9BQ9UPX0 1349 aa15.55■□□□□ 0.08
LIG3-205ENST00000585941 SOWAHBA6NEL2 793 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 H0YCG3 227 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 TUBB2AQ13885 445 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 KCTD2Q14681 263 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 GPAT2Q6NUI2 795 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 GBP6Q6ZN66 633 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 HAUS6Q7Z4H7 955 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 EHBP1Q8NDI1 1231 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 ACRBPQ8NEB7 543 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 SLC35C1Q96A29 364 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 TUBB2BQ9BVA1 445 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 RBPJLQ9UBG7 517 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms