RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 PANK4Q9NVE7 773 aa17.91■□□□□ 0.46
SS18-226ENST00000585241 TRPC6Q9Y210 931 aa17.91■□□□□ 0.46
SS18-226ENST00000585241 BIN1O00499 593 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 GAS2O43903 313 aaKnown RBP17.9■□□□□ 0.46
SS18-226ENST00000585241 MAFO75444 373 aaPredicted RBP17.9■□□□□ 0.46
SS18-226ENST00000585241 MYL3P08590 195 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 PSEN2P49810 448 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 RTP1P59025 263 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 PSMD2Q13200 908 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 MFSD10Q14728 455 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 EMC2Q15006 297 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 COBLL1Q53SF7 1204 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 GNASQ5JWF2 1037 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 ZNF658Q5TYW1 1059 aaPredicted RBP17.9■□□□□ 0.46
SS18-226ENST00000585241 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
SS18-226ENST00000585241 EXOC8Q8IYI6 725 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 MTG1Q9BT17 334 aaPredicted RBP17.9■□□□□ 0.46
SS18-226ENST00000585241 OLFML3Q9NRN5 406 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 SEL1LQ9UBV2 794 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 PCDHA2Q9Y5H9 948 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 COL4A3BPQ9Y5P4 624 aa17.9■□□□□ 0.46
SS18-226ENST00000585241 RSPH10B2B2RC85 870 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 HIP1RO75146 1068 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 TBCAO75347 108 aaKnown RBP17.89■□□□□ 0.45
SS18-226ENST00000585241 RSPH10BP0C881 870 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 INSRRP14616 1297 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 IDEP14735 1019 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 HOXC8P31273 242 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 CACNB1Q02641 598 aaPredicted RBP17.89■□□□□ 0.45
SS18-226ENST00000585241 LRRC41Q15345 812 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 KIAA0753Q2KHM9 967 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 DPCR1Q3MIW9 517 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 RNF180Q86T96 592 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 MLKLQ8NB16 471 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 PCSK9Q8NBP7 692 aaKnown RBP17.89■□□□□ 0.45
SS18-226ENST00000585241 SLC7A3Q8WY07 619 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 KIFAP3Q92845 792 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 ARMC5Q96C12 935 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 DRC1Q96MC2 740 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 FIZ1Q96SL8 496 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 JPH2Q9BR39 696 aaPredicted RBP17.89■□□□□ 0.45
SS18-226ENST00000585241 TSEN34Q9BSV6 310 aaKnown RBP17.89■□□□□ 0.45
SS18-226ENST00000585241 UNC93B1Q9H1C4 597 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 PARVGQ9HBI0 331 aa17.89■□□□□ 0.45
SS18-226ENST00000585241 FAM13AO94988 1023 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 C22orf31O95567 290 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 CAVIN2O95810 425 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 POLGP54098 1239 aaPredicted RBP17.88■□□□□ 0.45
SS18-226ENST00000585241 RAD51AP2Q09MP3 1159 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 PPFIA1Q13136 1202 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 CT47A1Q5JQC4 288 aaPredicted RBP17.88■□□□□ 0.45
SS18-226ENST00000585241 FAM26FQ5R3K3 315 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 LINC01465Q8N7H1 131 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 KIAA0895Q8NCT3 520 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 TSPY26PQ9H489 355 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 C17orf75Q9HAS0 396 aa17.88■□□□□ 0.45
SS18-226ENST00000585241 MOXD2PA6NHM9 499 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 RRN3P2A6NIE6 340 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 MAGEB2O15479 319 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 CABYRO75952 493 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 SMIM10L2AP0DMW4 78 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 SMIM10L2BP0DMW5 78 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 MAPTP10636 758 aaKnown RBP17.87■□□□□ 0.45
SS18-226ENST00000585241 ADAM17P78536 824 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 TBC1D8BQ0IIM8 1120 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 STK4Q13043 487 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 MTFR1Q15390 333 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 GRIK4Q16099 956 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 KCNA10Q16322 511 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 HERC4Q5GLZ8 1057 aaPredicted RBP17.87■□□□□ 0.45
SS18-226ENST00000585241 SFR1Q86XK3 245 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 KCNN1Q92952 543 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 ZNF333Q96JL9 665 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 PRDM10Q9NQV6 1147 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 GDAQ9Y2T3 454 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 NRCAMQ92823 1304 aa17.87■□□□□ 0.45
SS18-226ENST00000585241 MYH11P35749 1972 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 MBLAC1A4D2B0 266 aaPredicted RBP17.86■□□□□ 0.45
SS18-226ENST00000585241 ASGR1P07306 291 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 CCL5P13501 91 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 PLS3P13797 630 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 ARL2P36404 184 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 PPP1R2P41236 205 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 MARCH8Q5T0T0 291 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 ISM2Q6H9L7 571 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 CXCL17Q6UXB2 119 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 C11orf57Q6ZUT1 292 aaPredicted RBP17.86■□□□□ 0.45
SS18-226ENST00000585241 SESTD1Q86VW0 696 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 TRAPPC12Q8WVT3 735 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 BPIFA3Q9BQP9 254 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 GPRC5CQ9NQ84 441 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 LARSQ9P2J5 1176 aaKnown RBP17.86■□□□□ 0.45
SS18-226ENST00000585241 DACH1Q9UI36 760 aa17.86■□□□□ 0.45
SS18-226ENST00000585241 PPP1R3GB7ZBB8 358 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 MKRN4PQ13434 485 aaPredicted RBP17.85■□□□□ 0.45
SS18-226ENST00000585241 ANO6Q4KMQ2 910 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 FAM102BQ5T8I3 360 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 IER5Q5VY09 327 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 MTHFD1LQ6UB35 978 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 EPM2AIP1Q7L775 607 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms