RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CCDC148Q8NFR7 591 aa17■□□□□ 0.31
VAPA-209ENST00000585042 TMEM40Q8WWA1 233 aa17■□□□□ 0.31
VAPA-209ENST00000585042 EVPLQ92817 2033 aa17■□□□□ 0.31
VAPA-209ENST00000585042 BRF1Q92994 677 aa17■□□□□ 0.31
VAPA-209ENST00000585042 CDCA3Q99618 268 aaPredicted RBP17■□□□□ 0.31
VAPA-209ENST00000585042 RNF26Q9BY78 433 aaPredicted RBP17■□□□□ 0.31
VAPA-209ENST00000585042 SH3GLB2Q9NR46 395 aa17■□□□□ 0.31
VAPA-209ENST00000585042 NRBP2Q9NSY0 501 aa17■□□□□ 0.31
VAPA-209ENST00000585042 TMEM161AQ9NX61 479 aa17■□□□□ 0.31
VAPA-209ENST00000585042 GINS2Q9Y248 185 aa17■□□□□ 0.31
VAPA-209ENST00000585042 MYH9P35579 1960 aaKnown RBP17■□□□□ 0.31
VAPA-209ENST00000585042 MGEA5O60502 916 aa16.99■□□□□ 0.31
VAPA-209ENST00000585042 GTF2F1P35269 517 aaKnown RBP eCLIP16.99■□□□□ 0.31
VAPA-209ENST00000585042 NDUFV1P49821 464 aa16.99■□□□□ 0.31
VAPA-209ENST00000585042 EVCP57679 992 aa16.99■□□□□ 0.31
VAPA-209ENST00000585042 KIZQ2M2Z5 673 aa16.99■□□□□ 0.31
VAPA-209ENST00000585042 PRR16Q569H4 304 aa16.99■□□□□ 0.31
VAPA-209ENST00000585042 HERC4Q5GLZ8 1057 aaPredicted RBP16.99■□□□□ 0.31
VAPA-209ENST00000585042 JAKMIP1Q96N16 626 aaKnown RBP16.99■□□□□ 0.31
VAPA-209ENST00000585042 RIT2Q99578 217 aa16.99■□□□□ 0.31
VAPA-209ENST00000585042 ATP6V0A4Q9HBG4 840 aa16.99■□□□□ 0.31
VAPA-209ENST00000585042 LZTS1Q9Y250 596 aa16.99■□□□□ 0.31
VAPA-209ENST00000585042 WDR64B1ANS9 1081 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 LINC01565O15544 149 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 HOXA2O43364 376 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 EPB41L2O43491 1005 aaKnown RBP16.98■□□□□ 0.31
VAPA-209ENST00000585042 IFNAR1P17181 557 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 CDC42EP1Q00587 391 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 DSC3Q14574 896 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 NTRK3Q16288 839 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 FAM228AQ86W67 206 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 METTL13Q8N6R0 699 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 SMRP1Q8NCR6 262 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 C22orf23Q9BZE7 217 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 CLEC1BQ9P126 229 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 GABBR1Q9UBS5 961 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 SNX14Q9Y5W7 946 aa16.98■□□□□ 0.31
VAPA-209ENST00000585042 FNDC1Q4ZHG4 1894 aaPredicted RBP16.97■□□□□ 0.31
VAPA-209ENST00000585042 TBKBP1A7MCY6 615 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 RPS6KB1P23443 525 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
VAPA-209ENST00000585042 SFNP31947 248 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 NRIP1P48552 1158 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 GATMP50440 423 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 C1QBPQ07021 282 aaKnown RBP16.97■□□□□ 0.31
VAPA-209ENST00000585042 CLUL1Q15846 466 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 SPOUT1Q5T280 376 aaKnown RBP16.97■□□□□ 0.31
VAPA-209ENST00000585042 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 EFCAB12Q6NXP0 572 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 FAM177A1Q8N128 213 aaPredicted RBP16.97■□□□□ 0.31
VAPA-209ENST00000585042 LINC01465Q8N7H1 131 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 MICAL1Q8TDZ2 1067 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 LENG9Q96B70 501 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 MAP7D2Q96T17 732 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 OSMRQ99650 979 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 TLE6Q9H808 572 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 TLR9Q9NR96 1032 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 TYW1Q9NV66 732 aaKnown RBP16.97■□□□□ 0.31
VAPA-209ENST00000585042 PUF60Q9UHX1 559 aaKnown RBP16.97■□□□□ 0.31
VAPA-209ENST00000585042 SAMM50Q9Y512 469 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 KIAA1671Q9BY89 1806 aa16.97■□□□□ 0.31
VAPA-209ENST00000585042 FGF18O76093 207 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 REC8O95072 547 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 VTNP04004 478 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 CPA1P15085 419 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 ZSCAN20P17040 1043 aaPredicted RBP16.96■□□□□ 0.31
VAPA-209ENST00000585042 LAG3P18627 525 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 JAK3P52333 1124 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 NLRP11P59045 1033 aaKnown RBP16.96■□□□□ 0.31
VAPA-209ENST00000585042 PLCB3Q01970 1234 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 ADGRD2Q7Z7M1 963 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 RNF135Q8IUD6 432 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 COLGALT1Q8NBJ5 622 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 RDM1Q8NG50 284 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 RSPH1Q8WYR4 309 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 TMEM117Q9H0C3 514 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 ADAMTS10Q9H324 1103 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 CWH43Q9H720 699 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 DISC1Q9NRI5 854 aa16.96■□□□□ 0.31
VAPA-209ENST00000585042 ADAMTS3O15072 1205 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 PPFIA3O75145 1194 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 ATF7P17544 494 aaPredicted RBP16.95■□□□□ 0.3
VAPA-209ENST00000585042 PDIA3P30101 505 aaKnown RBP16.95■□□□□ 0.3
VAPA-209ENST00000585042 CBX2Q14781 532 aaPredicted RBP16.95■□□□□ 0.3
VAPA-209ENST00000585042 TMEM184AQ6ZMB5 413 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 SKAP1Q86WV1 359 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 THNSL1Q8IYQ7 743 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 RASGRP4Q8TDF6 673 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 SLC5A5Q92911 643 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 PHKBQ93100 1093 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 MFSD14AQ96MC6 490 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 UIMC1Q96RL1 719 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 AKT3Q9Y243 479 aa16.95■□□□□ 0.3
VAPA-209ENST00000585042 LOC730098B7Z3J9 87 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 FSCN2O14926 492 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 MSH4O15457 936 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 EDIL3O43854 480 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 ZNF862O60290 1169 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 GAS7O60861 476 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms